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Summary Expression Phenotypes Gene Literature (26) GO Terms (24) Nucleotides (113) Proteins (60) Interactants (334) Wiki
XB-GENEPAGE-491113

Show:     All X. tropicalis X. laevis

Nucleotide sequences for dicer1 - All

RefSeq mRNAs(7)
Models - Gene (30)
Models - mRNA (38)
mRNAs (10)
ESTs (18)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001129918 NM_001129918.2 endoribonuclease Dicer 5682 bp NP_001123390 X. tropicalis
XM_031890234 XM_031890234.1 XP_031746094.1 endoribonuclease Dicer isoform X1 12229 bp XP_031746094 X. tropicalis
XM_031890235 XM_031890235.1 XP_031746095.1 endoribonuclease Dicer isoform X1 6344 bp XP_031746095 X. tropicalis
NM_001170447 NM_001170447.1 dicer 1, ribonuclease III S homeolog 5758 bp NP_001163918 X. laevis.S
XM_041574045 XM_041574045.1 XP_041429979.1 dicer 1, ribonuclease III S homeolog isoform X1 7405 bp XP_041429979 X. laevis.S
XM_018230460 XM_018230460.2 endoribonuclease Dicer 6567 bp XP_018085949 X. laevis.L
XM_018230461 XM_018230461.2 endoribonuclease Dicer 6583 bp XP_018085950 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g37340 X. laevis.S
NCBI 10.1 XBXL10_1g35810 X. laevis.L
NCBI 10.0 XBXT10g007392 X. tropicalis
ENSEMBL 10.0 dicer1 X. tropicalis
Xenbase 9.2 gene2469 X. laevis.L
Xenbase 9.2 gene17258 X. laevis.S
JGI 9.1 Xelaev18039579m.g X. laevis.L
JGI 9.1 Xelaev18041289m.g X. laevis.S
Xenbase 9.1 gene24897 X. tropicalis
ENSEMBL 9.1 dicer1 X. tropicalis
JGI 8.0 Xetrov14034612m.g X. tropicalis
JGI 7.2 Xelaev16079937m.g X. laevis.S
JGI 7.1 Xetro.H01280 X. tropicalis
JGI 6.0 XeXenL6RMv10023099m.g X. laevis.S
JGI 6.0 XeXenL6RMv10032921m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000023315 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1850006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1850031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1850007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1850006 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1850010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1850089 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_185000008 X. tropicalis
JGI 4.1 gw1.185.89.1 X. tropicalis
JGI 4.1 gw1.185.7.1 X. tropicalis
JGI 4.1 gw1.185.6.1 X. tropicalis
JGI 4.1 e_gw1.185.89.1 X. tropicalis
JGI 4.1 e_gw1.185.7.1 X. tropicalis
JGI 4.1 e_gw1.185.6.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_185000033 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.1 XBmRNA67648 X. laevis.L
NCBI 10.1 XBmRNA70487 X. laevis.S
ENSEMBL 10.0 ENSXETT00000090471 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096069 X. tropicalis
NCBI 10.0 mRNA036640 X. tropicalis
Xenbase 9.2 rna50373 X. laevis.S
Xenbase 9.2 rna7196 X. laevis.L
Xenbase 9.1 rna49457 X. tropicalis
JGI 9.1 Xelaev18039579m X. laevis.L
JGI 9.1 Xelaev18041289m X. laevis.S
ENSEMBL 9.1 ENSXETT00000096069 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093061 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090471 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072352 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071635 X. tropicalis
ENSEMBL 9.1 ENSXETT00000050382 X. tropicalis
JGI 8.0 Xetrov14034612m X. tropicalis
JGI 7.2 Xelaev16079937m X. laevis.S
JGI 7.1 Xetro.H01280.3 X. tropicalis
JGI 7.1 Xetro.H01280.2 X. tropicalis
JGI 7.1 Xetro.H01280.1 X. tropicalis
JGI 6.0 XeXenL6RMv10023099m X. laevis.S
JGI 6.0 XeXenL6RMv10032921m X. laevis.S
JGI 4.1 gw1.185.7.1 X. tropicalis
JGI 4.1 gw1.185.6.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_185000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_185000033 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1850089 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1850007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1850006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1850006 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1850010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1850031 X. tropicalis
JGI 4.1 e_gw1.185.89.1 X. tropicalis
JGI 4.1 e_gw1.185.7.1 X. tropicalis
JGI 4.1 e_gw1.185.6.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000050382 X. tropicalis
JGI 4.1 gw1.185.89.1 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:7717421 BC167373 X. tropicalis NIH_XGC_tropInt1 intestine frog
EU338242 X. tropicalis
NM_001129918 X. tropicalis
XM_031890234 X. tropicalis
XM_031890235 X. tropicalis
GQ485552 X. laevis.S
NM_001170447 X. laevis.S
XM_041574045 X. laevis.S
XM_018230460 X. laevis.L
XM_018230461 X. laevis.L

ESTs (18)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7717421 CX978381 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TNeu027d12 AL644406 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu082l19 AL780136 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA061d04 CR424211 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7689534 CX913525 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689534 CX913524 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA032a01 BX740331 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7717421 CX978380 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
TTbA061d04 CR424212 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xl237g12 DC104907 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl313j02 DC127111 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL414a12ex BP673528 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:6631576 BU906566 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
xl277o04 DC116950 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl237g12 DC070670 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl277o04 DC081991 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl313j02 DC092007 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL414a12ex BP711390 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5