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Summary Expression Phenotypes Gene Literature (72) GO Terms (32) Nucleotides (365) Proteins (89) Interactants (718) Wiki
XB-GENEPAGE-493908

Show:     All X. tropicalis X. laevis

Nucleotide sequences for actn1 - All

RefSeq mRNAs(11)
Models - Gene (34)
Models - mRNA (56)
mRNAs (16)
ESTs (190)

RefSeq mRNAs (11)

Accession Version Protein Name Length Protein Species
NM_001079198 NM_001079198.1 alpha-actinin-1 2908 bp NP_001072666 X. tropicalis
XM_012968674 XM_012968674.3 alpha-actinin-1 isoform X1 3718 bp XP_012824128 X. tropicalis
XM_012968675 XM_012968675.3 alpha-actinin-1 isoform X2 3652 bp XP_012824129 X. tropicalis
NM_001090829 NM_001090829.1 actinin alpha 1 L homeolog 3658 bp NP_001084298 X. laevis.L
XM_018228789 XM_018228789.2 actinin alpha 1 L homeolog isoform X1 3713 bp XP_018084278 X. laevis.L
XM_041571979 XM_041571979.1 XP_041427913.1 actinin alpha 1 L homeolog isoform X2 3632 bp XP_041427913 X. laevis.L
XM_041571980 XM_041571980.1 XP_041427914.1 actinin alpha 1 L homeolog isoform X3 3633 bp XP_041427914 X. laevis.L
NM_001091370 NM_001091370.1 Alpha-actinin-1-like 2985 bp NP_001084839 X. laevis.S
XM_018231947 XM_018231947.2 uncharacterized protein LOC431885 isoform X1 3699 bp XP_018087436 X. laevis.S
XM_018231948 XM_018231948.2 uncharacterized protein LOC431885 isoform X2 3618 bp XP_018087437 X. laevis.S
XM_041574167 XM_041574167.1 XP_041430101.1 uncharacterized protein LOC431885 isoform X3 2786 bp XP_041430101 X. laevis.S

Models - Gene (34)

Source Version Model Species
NCBI 10.1 XBXL10_1g37128 X. laevis.S
NCBI 10.1 XBXL10_1g36129 X. laevis.L
NCBI 10.0 XBXT10g010669 X. tropicalis
ENSEMBL 10.0 actn1 X. tropicalis
Xenbase 9.2 gene13179 X. laevis.S
Xenbase 9.2 gene7284 X. laevis.L
JGI 9.1 Xelaev18041034m.g X. laevis.S
JGI 9.1 Xelaev18039961m.g X. laevis.L
Xenbase 9.1 gene1427 X. tropicalis
ENSEMBL 9.1 actn1 X. tropicalis
JGI 8.0 Xetrov14035371m.g X. tropicalis
JGI 7.2 Xelaev16035672m.g X. laevis.L
JGI 7.1 Xetro.H01707 X. tropicalis
JGI 6.0 XeXenL6RMv10041346m.g X. laevis.L
JGI 6.0 XeXenL6RMv10011849m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000017933 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1450019 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_145000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_145000019 X. tropicalis
JGI 4.1 gw1.145.112.1 X. tropicalis
JGI 4.1 gw1.145.113.1 X. tropicalis
JGI 4.1 gw1.145.15.1 X. tropicalis
JGI 4.1 gw1.145.95.1 X. tropicalis
JGI 4.1 gw1.145.96.1 X. tropicalis
JGI 4.1 e_gw1.145.112.1 X. tropicalis
JGI 4.1 e_gw1.145.113.1 X. tropicalis
JGI 4.1 e_gw1.145.15.1 X. tropicalis
JGI 4.1 e_gw1.145.95.1 X. tropicalis
JGI 4.1 e_gw1.145.96.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1450014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450111 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450112 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1450011 X. tropicalis

mRNAs based on gene models(56)

Source Version Model Species
NCBI 10.1 XBmRNA70024 X. laevis.S
NCBI 10.1 XBmRNA68380 X. laevis.L
NCBI 10.0 mRNA052779 X. tropicalis
ENSEMBL 10.0 ENSXETT00000098390 X. tropicalis
ENSEMBL 10.0 ENSXETT00000038881 X. tropicalis
ENSEMBL 10.0 ENSXETT00000100949 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070660 X. tropicalis
ENSEMBL 10.0 ENSXETT00000063807 X. tropicalis
ENSEMBL 10.0 ENSXETT00000068159 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103046 X. tropicalis
ENSEMBL 10.0 ENSXETT00000088730 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070539 X. tropicalis
Xenbase 9.2 rna21258 X. laevis.L
Xenbase 9.2 rna38330 X. laevis.S
ENSEMBL 9.1 ENSXETT00000038881 X. tropicalis
ENSEMBL 9.1 ENSXETT00000063807 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068159 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070539 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070660 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088730 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098390 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100949 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103046 X. tropicalis
Xenbase 9.1 rna4614 X. tropicalis
JGI 9.1 Xelaev18039961m X. laevis.L
JGI 9.1 Xelaev18041034m X. laevis.S
JGI 8.0 Xetrov14035371m X. tropicalis
JGI 7.2 Xelaev16035672m X. laevis.L
JGI 7.1 Xetro.H01707.2 X. tropicalis
JGI 7.1 Xetro.H01707.3 X. tropicalis
JGI 7.1 Xetro.H01707.6 X. tropicalis
JGI 7.1 Xetro.H01707.1 X. tropicalis
JGI 7.1 Xetro.H01707.5 X. tropicalis
JGI 7.1 Xetro.H01707.7 X. tropicalis
JGI 7.1 Xetro.H01707.4 X. tropicalis
JGI 6.0 XeXenL6RMv10011849m X. laevis.L
JGI 6.0 XeXenL6RMv10041346m X. laevis.L
ENSEMBL 4.1 ENSXETT00000038881 X. tropicalis
JGI 4.1 e_gw1.145.15.1 X. tropicalis
JGI 4.1 e_gw1.145.96.1 X. tropicalis
JGI 4.1 e_gw1.145.95.1 X. tropicalis
JGI 4.1 e_gw1.145.113.1 X. tropicalis
JGI 4.1 e_gw1.145.112.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1450019 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1450014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1450011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450111 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450112 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_145000019 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_145000011 X. tropicalis
JGI 4.1 gw1.145.112.1 X. tropicalis
JGI 4.1 gw1.145.113.1 X. tropicalis
JGI 4.1 gw1.145.15.1 X. tropicalis
JGI 4.1 gw1.145.95.1 X. tropicalis
JGI 4.1 gw1.145.96.1 X. tropicalis

mRNAs from cDNA libraries (16)

Clone Accession Species Library Anatomy Stage
IMAGE:7799756 BC123984 X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7533165 BC167879 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
NM_001079198 X. tropicalis
XM_012968674 X. tropicalis
XM_012968675 X. tropicalis
IMAGE:5570582 BC043995 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6873085 BC053828 X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
NM_001090829 X. laevis.L
XM_018228789 X. laevis.L
XM_041571979 X. laevis.L
XM_041571980 X. laevis.L
IMAGE:6318403 BC070594 X. laevis.S
NM_001091370 X. laevis.S
XM_018231947 X. laevis.S
XM_018231948 X. laevis.S
XM_041574167 X. laevis.S

ESTs (190)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu073c14 BX683660 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA034m14 CR588502 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7743234 DN035676 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7716471 CX977079 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7690122 CX914333 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7663048 CX846158 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TTpA049a05 BX716777 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA048p16 BX739838 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5379726 BQ523793 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6984357 CF151446 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
TTpA033k19 BX745116 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7639984 CX315413 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8960266 EL653372 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
XZT12348 CX320676 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8958655 EL654255 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7620986 CX341643 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st14j05 DC166963 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7621603 CX342274 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st15j05 DC167258 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT1457 CX360679 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636403 CX406103 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st7k12 DC175198 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7604236 CX411252 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st37c12 DC175904 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT5171 CX414102 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st66b22 DC182956 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7602426 DR893106 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8960574 EL655251 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7621415 DR898710 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7530685 CX419902 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7662569 CX844399 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7793126 CX814106 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651801 CX813337 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649373 CX809128 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7466706 CV813607 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8958571 EL658772 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7643152 CX798643 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7532044 CX432900 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533165 CX433994 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526551 CX443666 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8963574 EL660698 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:7564558 CX475196 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8958644 EL662926 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7553000 CX496022 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8913366 EL825387 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8853800 EL815632 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8928824 EL677299 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8922800 EL674350 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8924781 EL670232 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8931494 EL666217 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8951587 EL663938 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:8957853 EL663624 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:5309321 BQ392119 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8951609 EL662011 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:8956014 EL658520 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8954132 EL658160 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8956191 EL657556 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8955579 EL655759 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8938158 EL641359 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8944501 EG655935 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8944078 EG653779 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8944378 EG652382 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8952821 EG652125 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:9009731 EL853392 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:5384633 BQ397286 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8952845 EG651944 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8948773 EG650732 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
TNeu015j10 AL636059 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu014j03 AL636799 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu020o03 AL637889 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu017h15 AL645146 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu037h05 AL657742 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu040m09 AL660092 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu052c07 AL673129 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu052c11 AL673131 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu062o23 AL673465 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu077i20 AL777879 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu073c14 AL781880 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu121p24 AL788423 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu119n23 AL792417 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8888756 EL847586 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8888838 EL847508 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8888020 EL846228 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8915400 EL828043 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7799756 DN061603 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7027593 CF782090 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TGas035n10 AL654397 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7025960 CF785354 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TGas060f22 AL682143 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7028026 CF786174 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTbA026b03 CR415985 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas127p05 AL961452 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA018c18 CR417230 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6977299 CF150065 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
THdA032j21 CR567255 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:6977299 CF223727 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:9015961 EL862605 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
THdA021h03 CR572798 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7663048 CX846157 3' X. tropicalis NIH_XGC_tropBrn3 brain frog