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Summary Expression Phenotypes Gene Literature (12) GO Terms (9) Nucleotides (61) Proteins (31) Interactants (221) Wiki
XB-GENEPAGE-5779642

Show:     All X. tropicalis X. laevis

Nucleotide sequences for casp3 - All

RefSeq mRNAs(6)
Models - Gene (20)
Models - mRNA (21)
mRNAs (7)
ESTs (5)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
XM_002934263 XM_002934263.5 caspase-3 isoform X2 1064 bp XP_002934309 X. tropicalis
XM_031895434 XM_031895434.1 XP_031751294.1 caspase-3 isoform X1 1092 bp XP_031751294 X. tropicalis
XM_041589061 XP_041444995.1 caspase-3 isoform X1 1491 bp XP_041444995 X. laevis.L
XM_041589062 XP_041444996.1 caspase-3 isoform X2 1635 bp XP_041444996 X. laevis.L
XM_041589064 XP_041444998.1 caspase-3 isoform X3 1541 bp XP_041444998 X. laevis.L
XM_041589065 XP_041444999.1 caspase-3 isoform X4 1160 bp XP_041444999 X. laevis.L

Models - Gene (20)

Source Version Model Species
NCBI 10.0 XBXT10g016785 X. tropicalis
NCBI 10.1 XBXL10_1g881 X. laevis.L
ENSEMBL 10.0 casp3.1 X. tropicalis
Xenbase 9.1 gene1778 X. tropicalis
ENSEMBL 9.1 ENSXETG00000030678 X. tropicalis
JGI 7.1 Xetro.A02976 X. tropicalis
JGI 4.1 gw1.90.103.1 X. tropicalis
JGI 4.1 gw1.90.104.1 X. tropicalis
JGI 4.1 gw1.90.32.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_900022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_900031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_900101 X. tropicalis
JGI 4.1 estExt_Genewise1.C_900102 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_900046 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_90000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_90000046 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_900011 X. tropicalis
JGI 4.1 e_gw1.90.32.1 X. tropicalis
JGI 4.1 e_gw1.90.104.1 X. tropicalis
JGI 4.1 e_gw1.90.103.1 X. tropicalis

mRNAs based on gene models(21)

Source Version Model Species
NCBI 10.1 XBmRNA1314 X. laevis.L
ENSEMBL 10.0 ENSXETT00000065234 X. tropicalis
NCBI 10.0 mRNA083059 X. tropicalis
Xenbase 9.1 rna5815 X. tropicalis
ENSEMBL 9.1 ENSXETT00000065234 X. tropicalis
JGI 7.1 Xetro.A02976.2 X. tropicalis
JGI 7.1 Xetro.A02976.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_900101 X. tropicalis
JGI 4.1 e_gw1.90.103.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_90000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_90000046 X. tropicalis
JGI 4.1 gw1.90.103.1 X. tropicalis
JGI 4.1 gw1.90.104.1 X. tropicalis
JGI 4.1 gw1.90.32.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_900102 X. tropicalis
JGI 4.1 e_gw1.90.104.1 X. tropicalis
JGI 4.1 e_gw1.90.32.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_900011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_900046 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_900022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_900031 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
TTpA025a09 CU075885 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
XM_002934263 X. tropicalis
XM_031895434 X. tropicalis
XM_041589061 X. laevis.L
XM_041589062 X. laevis.L
XM_041589064 X. laevis.L
XM_041589065 X. laevis.L

ESTs (5)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA073h08 BX735726 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA025a09 BX738906 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA022p24 CR439748 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA073h08 BX735727 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA025a09 BX738907 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40