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Summary Expression Phenotypes Gene Literature (6) GO Terms (53) Nucleotides (152) Proteins (76) Interactants (42) Wiki
XB-GENEPAGE-5895461

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ercc1 - All

RefSeq mRNAs(6)
Models - Gene (25)
Models - mRNA (37)
mRNAs (11)
ESTs (55)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001113921 NM_001113921.1 DNA excision repair protein ERCC-1 1132 bp NP_001107393 X. tropicalis
XM_012965971 XM_012965971.3 DNA excision repair protein ERCC-1 isoform X2 1179 bp XP_012821425 X. tropicalis
XM_031904794 XM_031904794.1 XP_031760654.1 DNA excision repair protein ERCC-1 isoform X1 1246 bp XP_031760654 X. tropicalis
XM_031904795 XM_031904795.1 XP_031760655.1 DNA excision repair protein ERCC-1 isoform X3 1070 bp XP_031760655 X. tropicalis
NM_001087029 NM_001087029.1 excision repair cross-complementing 1 1610 bp NP_001080498 X. laevis.L
XM_018224304 XM_018224304.2 excision repair cross-complementing 1 isoform X1 1319 bp XP_018079793 X. laevis.L

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g30821 X. laevis.L
NCBI 10.0 XBXT10g013360 X. tropicalis
ENSEMBL 10.0 ercc1 X. tropicalis
Xenbase 9.2 gene19095 X. laevis.L
JGI 9.1 Xelaev18035087m.g X. laevis.L
Xenbase 9.1 gene26704 X. tropicalis
ENSEMBL 9.1 ercc1 X. tropicalis
JGI 8.0 Xetrov14045979m.g X. tropicalis
JGI 7.1 Xetro.G01208 X. tropicalis
JGI 6.0 XeXenL6RMv10023425m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000026094 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5910001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_591000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_591000001 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5910001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5910001 X. tropicalis
JGI 4.1 e_gw1.591.7.1 X. tropicalis
JGI 4.1 e_gw1.591.73.1 X. tropicalis
JGI 4.1 gw1.591.7.1 X. tropicalis
JGI 4.1 gw1.591.72.1 X. tropicalis
JGI 4.1 gw1.591.73.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5910007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5910072 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5910073 X. tropicalis
JGI 4.1 e_gw1.591.72.1 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.1 XBmRNA58175 X. laevis.L
NCBI 10.0 mRNA066111 X. tropicalis
ENSEMBL 10.0 ENSXETT00000055209 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072236 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112249 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096794 X. tropicalis
ENSEMBL 10.0 ENSXETT00000121883 X. tropicalis
Xenbase 9.2 rna55754 X. laevis.L
ENSEMBL 9.1 ENSXETT00000055209 X. tropicalis
JGI 9.1 Xelaev18035087m X. laevis.L
ENSEMBL 9.1 ENSXETT00000072236 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096794 X. tropicalis
Xenbase 9.1 rna52269 X. tropicalis
JGI 8.0 Xetrov14045979m X. tropicalis
JGI 7.1 Xetro.G01208.1 X. tropicalis
JGI 7.1 Xetro.G01208.3 X. tropicalis
JGI 7.1 Xetro.G01208.6 X. tropicalis
JGI 7.1 Xetro.G01208.7 X. tropicalis
JGI 7.1 Xetro.G01208.4 X. tropicalis
JGI 7.1 Xetro.G01208.2 X. tropicalis
JGI 7.1 Xetro.G01208.5 X. tropicalis
JGI 6.0 XeXenL6RMv10023425m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_591000001 X. tropicalis
JGI 4.1 e_gw1.591.72.1 X. tropicalis
JGI 4.1 e_gw1.591.73.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000055209 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5910001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5910001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5910001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5910007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5910072 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5910073 X. tropicalis
JGI 4.1 e_gw1.591.7.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_591000001 X. tropicalis
JGI 4.1 gw1.591.7.1 X. tropicalis
JGI 4.1 gw1.591.72.1 X. tropicalis
JGI 4.1 gw1.591.73.1 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
IMAGE:7539705 BC157331 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:9040468 BC171206 X. tropicalis
IMAGE:9040470 BC171208 X. tropicalis
TGas115d11 CU025024 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001113921 X. tropicalis
XM_012965971 X. tropicalis
XM_031904794 X. tropicalis
XM_031904795 X. tropicalis
IMAGE:5543252 BC043824 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001087029 X. laevis.L
XM_018224304 X. laevis.L

ESTs (55)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9016703 EL863554 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTbA076f06 CR441468 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
st105c17 DC191783 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
THdA046l04 CR587791 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
st106c17 DC192761 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7733780 DN018547 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7654163 CX823341 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7788546 CX333766 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610025 CX376699 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st107c17 DC193734 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8890342 EL850144 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7539705 CX452380 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8883204 EL838849 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs24J08 CN084960 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs07B03 CN092992 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7560496 CX463700 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8917330 EL831006 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7544919 CX486704 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8929817 EL678920 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7553440 CX491701 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas083m24 AL775010 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7559351 CX514600 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu106g18 AL788522 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu109j04 AL794609 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas115d11 AL970104 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:9016703 EL863555 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TGas115d11 BX755725 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7539705 CX452379 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560496 CX463699 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544919 CX486703 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553440 CX491700 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559351 CX514599 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu106g18 BX690327 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu109j04 BX698041 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA076f06 CR441469 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA046l04 CR587792 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7624965 CX402260 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598925 DR892040 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7788546 DR904923 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs24J08 CN084959 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7642214 CX796421 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7733780 DN018546 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7738198 DN026462 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8929817 EL678919 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8917330 EL831007 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8883204 EL838850 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8890342 EL850145 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XL180e22 BJ617331 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGp998M1410648 BX851587 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:5543252 BQ736991 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4784053 BM262421 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGp998N2112243 BX845016 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4783307 BI348446 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL180e22 BJ633820 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4784053 BM262103 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage