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Summary Expression Phenotypes Gene Literature (9) GO Terms (17) Nucleotides (188) Proteins (39) Interactants (180) Wiki
XB-GENEPAGE-5939295

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ctdnep1 - All

RefSeq mRNAs(4)
Models - Gene (22)
Models - mRNA (25)
mRNAs (7)
ESTs (80)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001017177 NM_001017177.2 CTD nuclear envelope phosphatase 1 1104 bp NP_001017177 X. tropicalis
XM_031897958 XM_031897958.1 XP_031753818.1 CTD nuclear envelope phosphatase 1 isoform X1 1291 bp XP_031753818 X. tropicalis
NM_001096787 NM_001096787.1 CTD nuclear envelope phosphatase 1 S homeolog 1076 bp NP_001090256 X. laevis.S
NM_001090723 NM_001090723.1 CTD nuclear envelope phosphatase 1 735 bp NP_001084192 X. laevis.L

Models - Gene (22)

Source Version Model Species
NCBI 10.1 XBXL10_1g14916 X. laevis.L
NCBI 10.1 XBXL10_1g17561 X. laevis.S
NCBI 10.0 XBXT10g002554 X. tropicalis
ENSEMBL 10.0 ctdnep1 X. tropicalis
Xenbase 9.2 gene6956 X. laevis.L
Xenbase 9.2 gene13911 X. laevis.S
JGI 9.1 Xelaev18001080m.g X. laevis.S
JGI 9.1 Xelaev18019667m.g X. laevis.L
Xenbase 9.1 gene18269 X. tropicalis
JGI 7.2 Xelaev16078266m.g X. laevis.L
JGI 7.2 Xelaev16067701m.g X. laevis.S
JGI 7.1 Xetro.K04611 X. tropicalis
JGI 6.0 XeXenL6RMv10037605m.g X. laevis.L
JGI 6.0 XeXenL6RMv10019399m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000006637 X. tropicalis
JGI 4.1 e_gw1.9746.2.1 X. tropicalis
JGI 4.1 e_gw1.9746.1.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_9746000001 X. tropicalis
JGI 4.1 gw1.9746.3.1 X. tropicalis
JGI 4.1 gw1.9746.2.1 X. tropicalis
JGI 4.1 gw1.9746.1.1 X. tropicalis
JGI 4.1 e_gw1.9746.3.1 X. tropicalis

mRNAs based on gene models(25)

Source Version Model Species
NCBI 10.1 XBmRNA27734 X. laevis.L
NCBI 10.1 XBmRNA32344 X. laevis.S
ENSEMBL 10.0 ENSXETT00000110506 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110288 X. tropicalis
NCBI 10.0 mRNA012933 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112448 X. tropicalis
ENSEMBL 10.0 ENSXETT00000115080 X. tropicalis
Xenbase 9.2 rna40500 X. laevis.S
Xenbase 9.2 rna20309 X. laevis.L
Xenbase 9.1 rna38908 X. tropicalis
JGI 9.1 Xelaev18019667m X. laevis.L
JGI 9.1 Xelaev18001080m X. laevis.S
JGI 7.2 Xelaev16078266m X. laevis.L
JGI 7.2 Xelaev16067701m X. laevis.S
JGI 7.1 Xetro.K04611.1 X. tropicalis
JGI 6.0 XeXenL6RMv10037605m X. laevis.L
JGI 6.0 XeXenL6RMv10019399m X. laevis.S
JGI 4.1 gw1.9746.2.1 X. tropicalis
JGI 4.1 e_gw1.9746.2.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000014538 X. tropicalis
JGI 4.1 e_gw1.9746.1.1 X. tropicalis
JGI 4.1 gw1.9746.3.1 X. tropicalis
JGI 4.1 e_gw1.9746.3.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_9746000001 X. tropicalis
JGI 4.1 gw1.9746.1.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
TEgg035l07 CR760700 X. tropicalis
NM_001017177 X. tropicalis
XM_031897958 X. tropicalis
IMAGE:6862930 BC082639 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001096787 X. laevis.S
AB084264 X. laevis.L
NM_001090723 X. laevis.L

ESTs (80)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7579927 CX418849 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7667042 CX853628 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7706849 CX959110 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7672929 CX881490 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA073o19 CR434610 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu132e15 AL788112 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas001f01 AL594658 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas018k09 AL633759 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas046e23 AL651928 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas076d10 AL775295 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas084f02 AL783935 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas128l22 AL961519 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas093j03 AL962221 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7603896 CX395995 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas137g19 AL968586 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas092d10 AL969414 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8920400 EL834772 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8854784 EL817125 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7571137 CX511658 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas076d10 BX752031 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas137g19 BX757531 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas128l22 BX761509 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7579927 CX418848 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569627 CX457969 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7571137 CX511657 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7667042 CX853627 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7659474 CX839244 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7603896 DR893570 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA054j07 BX721258 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7706849 CX959109 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7672929 CX881489 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8854784 EL817126 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7511746 CX740562 3' X. tropicalis NIH_XGC_tropGas5 whole organism NF stage 10 to NF stage 18
TTbA073o19 CR434611 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas077j03 AL964271 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas092d10 BX752876 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XL088l23 BJ066949 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
PBX0103C08 AW641184 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0120C02 AW642666 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6323371 CA971833 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:4783880 BM262461 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6868198 CA981657 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:7295617 CO384908 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:6633568 BU908203 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998L1614204 BX844396 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6862930 CA986587 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3474244 BG163077 5' X. laevis.L Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
XL150n06 BJ095591 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL168i02 BJ614540 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL175e20 BJ615994 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL188d14 BJ619148 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3751507 BG345883 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
xl254o10 DC110243 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl260l10 DC111963 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl272n23 DC115553 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl284p20 DC118906 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl340f15 DC135010 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl293e20 DC121225 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl320c18 DC129037 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL414d02ex BP673579 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL422a05ex BP676473 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:4683580 BQ733223 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
BE025870 BE025870 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XL414d02ex BP711427 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL088l23 BJ084290 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl340f15 DC098897 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl320c18 DC093293 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl293e20 DC086437 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl272n23 DC080623 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl254o10 DC075595 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3751507 BG023506 3' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XL188d14 BJ635787 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL175e20 BJ632594 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL168i02 BJ631232 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL150n06 BJ099486 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3474244 BG160963 3' X. laevis.S Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
IMAGE:7295617 CO384730 3' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:4783880 BM262137 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL018l19 BJ048112 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL422a05ex BP713760 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5