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Summary Expression Phenotypes Gene Literature (24) GO Terms (121) Nucleotides (166) Proteins (65) Interactants (539) Wiki
XB-GENEPAGE-6072919

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pdgfra - All

RefSeq mRNAs(7)
Models - Gene (29)
Models - mRNA (40)
mRNAs (11)
ESTs (65)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001102820 NM_001102820.1 platelet-derived growth factor receptor alpha precursor 3560 bp NP_001096290 X. tropicalis
XM_012963365 XM_012963365.3 platelet-derived growth factor receptor alpha isoform X1 6874 bp XP_012818819 X. tropicalis
XM_031900856 XM_031900856.1 XP_031756716.1 platelet-derived growth factor receptor alpha isoform X1 6075 bp XP_031756716 X. tropicalis
NM_001087084 NM_001087084.1 platelet-derived growth factor receptor alpha precursor 6114 bp NP_001080553 X. laevis.L
XM_018269172 XM_018269172.2 platelet-derived growth factor receptor alpha isoform X1 6574 bp XP_018124661 X. laevis.L
XM_018243143 XM_018243143.2 platelet-derived growth factor receptor alpha-like 3881 bp XP_018098632 X. laevis.S
XM_018243144 XM_018243144.2 platelet-derived growth factor receptor alpha-like 4274 bp XP_018098633 X. laevis.S

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g3800 X. laevis.S
NCBI 10.1 XBXL10_1g815 X. laevis.L
NCBI 10.0 XBXT10g008337 X. tropicalis
ENSEMBL 10.0 znf84 X. tropicalis
Xenbase 9.2 gene10104 X. laevis.L
Xenbase 9.2 gene1515 X. laevis.S
JGI 9.1 Xelaev18009061m.g X. laevis.S
JGI 9.1 Xelaev18005286m.g X. laevis.L
Xenbase 9.1 gene565 X. tropicalis
ENSEMBL 9.1 pdgfra X. tropicalis
JGI 8.0 Xetrov14005078m.g X. tropicalis
JGI 7.2 Xelaev16043350m.g X. laevis.L
JGI 7.1 Xetro.A03047 X. tropicalis
JGI 6.0 XeXenL6RMv10037753m.g X. laevis.L
JGI 4.1 fgenesh1_pm.C_scaffold_107000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_107000026 X. tropicalis
JGI 4.1 e_gw1.107.101.1 X. tropicalis
JGI 4.1 e_gw1.107.103.1 X. tropicalis
JGI 4.1 e_gw1.107.5.1 X. tropicalis
JGI 4.1 gw1.107.101.1 X. tropicalis
JGI 4.1 gw1.107.103.1 X. tropicalis
JGI 4.1 gw1.107.5.1 X. tropicalis
JGI 4.1 AST_1_query X. tropicalis
JGI 4.1 estExt_Genewise1.C_1070005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1070101 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1070103 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1070025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1070006 X. tropicalis
ENSEMBL 4.1 ENSXETG00000021035 X. tropicalis

mRNAs based on gene models(40)

Source Version Model Species
NCBI 10.1 XBmRNA1181 X. laevis.L
NCBI 10.1 XBmRNA6943 X. laevis.S
NCBI 10.0 mRNA041433 X. tropicalis
ENSEMBL 10.0 ENSXETT00000045488 X. tropicalis
Xenbase 9.2 rna29376 X. laevis.L
Xenbase 9.2 rna4406 X. laevis.S
ENSEMBL 9.1 ENSXETT00000088257 X. tropicalis
Xenbase 9.1 rna1752 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075040 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075543 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076644 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080292 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080775 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089366 X. tropicalis
JGI 9.1 Xelaev18005286m X. laevis.L
JGI 9.1 Xelaev18009061m X. laevis.S
ENSEMBL 9.1 ENSXETT00000094397 X. tropicalis
ENSEMBL 9.1 ENSXETT00000045488 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072648 X. tropicalis
JGI 8.0 Xetrov14005078m X. tropicalis
JGI 7.2 Xelaev16043350m X. laevis.L
JGI 7.1 Xetro.A03047.1 X. tropicalis
JGI 7.1 Xetro.A03047.3 X. tropicalis
JGI 7.1 Xetro.A03047.2 X. tropicalis
JGI 6.0 XeXenL6RMv10037753m X. laevis.L
JGI 4.1 estExt_Genewise1.C_1070103 X. tropicalis
JGI 4.1 e_gw1.107.101.1 X. tropicalis
JGI 4.1 e_gw1.107.103.1 X. tropicalis
JGI 4.1 e_gw1.107.5.1 X. tropicalis
JGI 4.1 ENSXETT00000045488 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1070025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1070006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1070005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1070101 X. tropicalis
JGI 4.1 AST_1_query X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_107000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_107000006 X. tropicalis
JGI 4.1 gw1.107.101.1 X. tropicalis
JGI 4.1 gw1.107.103.1 X. tropicalis
JGI 4.1 gw1.107.5.1 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
IMAGE:7613883 BC135576 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001102820 X. tropicalis
XM_012963365 X. tropicalis
XM_031900856 X. tropicalis
IMAGE:5570729 BC043948 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
M80798 X. laevis.L
NM_001087084 X. laevis.L
U11725 X. laevis.L
XM_018269172 X. laevis.L
XM_018243143 X. laevis.S
XM_018243144 X. laevis.S

ESTs (65)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7643012 CX798003 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7617672 DR897541 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609890 DR895251 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632321 CX398118 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA053m12 CR587657 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8890509 EL850306 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7632173 CX397593 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613883 CX389519 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602117 CX365518 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8934968 EL636401 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7652615 CX815389 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8863612 EL700147 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7553258 CX491765 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8963627 EL658555 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:7553597 CX491794 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu108l08 AL790777 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8910849 EL809971 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
st13a24 DC166503 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7517375 CX748534 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:8891576 EL852021 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:5384234 BQ396571 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7644845 CX800803 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8890509 EL850307 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8910849 EL809972 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
rst13a24 DC136435 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7553258 CX491764 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553597 CX491793 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu108j08 BX693437 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7517375 CX748533 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:5384234 BQ396570 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
THdA053m12 CR587658 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7602117 CX365517 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613883 CX389518 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632321 CX398117 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609890 DR895250 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7617672 DR897540 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7643012 CX798002 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644845 CX800802 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7652615 CX815388 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8934968 EL636400 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8863612 EL700146 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8891576 EL852022 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:4202414 BG555010 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL089b08 BJ067057 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4202414 BG554325 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8533023 EB478957 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL055h13 BJ070076 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3398844 BE576046 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
XL151o06 BJ095894 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3549778 BG578841 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
XL013c07 BJ029667 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL056m10 BJ070509 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6874431 CB199404 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6881579 CB208728 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:5570729 BQ734333 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL205p23 BJ623792 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL056m10 BJ087539 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6880033 CB560543 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL013c07 BJ044382 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL205p23 BJ640386 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL089b08 BJ084400 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL151o06 BJ099771 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4202414 BG161582 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL055h13 BJ087114 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3549778 BG554636 3' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26