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Summary Expression Phenotypes Gene Literature (2) GO Terms (0) Nucleotides (186) Proteins (31) Interactants (69) Wiki
XB-GENEPAGE-6469311

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for scaf1 - All

Models - Gene (13)
Models - mRNA (16)
mRNAs (5)
ESTs (122)

Models - Gene (13)

Source Version Model Species
NCBI 10.0 XBXT10g010366 X. tropicalis
NCBI 10.1 XBXL10_1g33698 X. laevis.S
NCBI 10.1 XBXL10_1g31769 X. laevis.L
JGI 9.1 Xelaev18037783m.g X. laevis.S
JGI 9.1 Xelaev18036050m.g X. laevis.L
Xenbase 9.1 gene6563 X. tropicalis
Xenbase 9.2 gene19249 X. laevis.S
Xenbase 9.2 gene18126 X. laevis.L
JGI 7.1 Xetro.G01825 X. tropicalis
JGI 6.0 XeXenL6RMv10009116m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000002859 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_587000005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5870005 X. tropicalis

Models - mRNA (16)

Source Version Model Species
NCBI 10.0 mRNA051283 X. tropicalis
NCBI 10.1 XBmRNA59986 X. laevis.L
NCBI 10.1 XBmRNA63640 X. laevis.S
JGI 9.1 Xelaev18036050m X. laevis.L
JGI 9.1 Xelaev18037783m X. laevis.S
Xenbase 9.1 rna21187 X. tropicalis
Xenbase 9.2 rna52974 X. laevis.L
Xenbase 9.2 rna56233 X. laevis.S
JGI 7.1 Xetro.G01825.2 X. tropicalis
JGI 7.1 Xetro.G01825.3 X. tropicalis
JGI 7.1 Xetro.G01825.1 X. tropicalis
JGI 6.0 XeXenL6RMv10009116m X. laevis.S
ENSEMBL 4.1 ENSXETT00000006262 X. tropicalis
ENSEMBL 4.1 ENSXETT00000006263 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_587000005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5870005 X. tropicalis

mRNAs (5)

Clone Accession Species Library Anatomy Stage
XM_002940237 X. tropicalis
XM_004916277 X. tropicalis
XM_018228154 X. laevis.S
XM_018226341 X. laevis.L
XM_018226340 X. laevis.L

ESTs (122)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8886699 EL843856 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8924735 EL670241 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
xtbs22J08 CN083565 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7628413 CX382143 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620314 CX340777 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7554475 CX493213 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550269 CX485962 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546437 CX499591 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7614839 CX390872 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611525 CX378226 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7850067 DT388166 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7532732 CX433646 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551162 CX510293 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7610546 DR895554 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7718572 CX980823 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7694806 CX923102 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691277 CX916152 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7659820 CX839672 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7654985 CX824814 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7651595 CX813224 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7573826 CX440179 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7523814 CX438105 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas135h13 AL966488 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas141h06 AL957970 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas040d06 AL651341 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas034k17 AL649084 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas013f17 AL632122 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA049g24 BX727902 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas058l13 AL682082 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:9014320 EL860711 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9014319 EL860418 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8886699 EL843857 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8924735 EL670240 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
xtbs22J08 CN083564 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7850067 DT388165 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7694806 CX923101 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7659820 CX839671 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7654985 CX824813 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7614839 DR896472 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610546 DR895553 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7718572 CX980822 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7691277 CX916151 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7651595 CX813223 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7554475 CX493212 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550269 CX485961 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7523814 CX438104 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532732 CX433645 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7628413 CX382142 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611525 CX378225 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620314 CX340776 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas141h06 BX764983 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
eomes-HAR204 BX764954 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas135h13 BX758754 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas058l13 BX747434 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA049g24 BX727903 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu107b02 BX699305 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xlk3j04ex DC053785 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk67i02ex DC056622 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk52c05ex DC033139 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7982034 DR716185 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7979664 DR715862 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL478p05ex BP695946 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL450e16ex BP686094 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL519g18ex BP706995 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL516n12ex BP706103 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7295951 CO388899 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL436c19ex BP680898 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998O0912311 BX852301 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL214h22 BJ626321 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL200g09 BJ622271 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL199p11 BJ622144 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL198o04 BJ621854 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL176b02 BJ616203 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL175f23 BJ616013 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL165c11 BJ613777 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL147e02 BJ094962 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL144g01 BJ094083 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL087e14 BJ075050 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL071l17 BJ074873 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL110p14 BJ074078 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL066d10 BJ060576 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL067o03 BJ061072 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL106m22 BJ068470 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL089n17 BJ067216 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL076p06 BJ063658 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL076j04 BJ063530 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL040c23 BJ037333 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL008o15 BJ041568 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL016o19 BJ032522 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6874718 CB199681 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6635600 BU909886 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5570144 BQ736651 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3431340 BG345636 5' X. laevis.S Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:4059860 BG018744 5' X. laevis.S Wellcome CRC pCS2+ st19-26 whole organism NF stage 19 to NF stage 26
IMAGE:3749428 BF615283 5' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
PBX0143H07 AW644829 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:7982034 DR716135 3' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL448e21ex BP721060 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL436c19ex BP717434 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5