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Summary Expression Phenotypes Gene Literature (98) GO Terms (67) Nucleotides (149) Proteins (60) Interactants (365) Wiki
XB-GENEPAGE-853335

Show:     All X. tropicalis X. laevis

Nucleotide sequences for sp1 - All

RefSeq mRNAs(9)
Models - Gene (28)
Models - mRNA (33)
mRNAs (12)
ESTs (50)

RefSeq mRNAs (9)

Accession Version Protein Name Length Protein Species
NM_203808 NM_203808.1 transcription factor Sp1 1690 bp NP_989139 X. tropicalis
XM_012956652 XM_012956652.3 transcription factor Sp1 isoform X1 6699 bp XP_012812106 X. tropicalis
XM_012956653 XM_012956653.3 transcription factor Sp1 isoform X2 6696 bp XP_012812107 X. tropicalis
XM_012956654 XM_012956654.3 transcription factor Sp1 isoform X3 6447 bp XP_012812108 X. tropicalis
XM_012956655 XM_012956655.3 transcription factor Sp1 isoform X4 6444 bp XP_012812109 X. tropicalis
XM_018244983 XM_018244983.2 transcription factor Sp1 isoform X2 6565 bp XP_018100472 X. laevis.L
XM_041582588 XM_041582588.1 XP_041438522.1 transcription factor Sp1 isoform X1 6569 bp XP_041438522 X. laevis.L
XM_041582589 XM_041582589.1 XP_041438523.1 transcription factor Sp1 isoform X3 6524 bp XP_041438523 X. laevis.L
XM_018250155 XM_018250155.2 transcription factor Sp1 3806 bp XP_018105644 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g8262 X. laevis.L
NCBI 10.1 XBXL10_1g10856 X. laevis.S
NCBI 10.0 XBXT10g011141 X. tropicalis
ENSEMBL 10.0 sp1 X. tropicalis
Xenbase 9.2 gene3193 X. laevis.S
Xenbase 9.2 gene41989 X. laevis.L
JGI 9.1 Xelaev18016053m.g X. laevis.S
JGI 9.1 Xelaev18013590m.g X. laevis.L
Xenbase 9.1 gene32296 X. tropicalis
ENSEMBL 9.1 sp1 X. tropicalis
JGI 8.0 Xetrov14010345m.g X. tropicalis
JGI 7.2 Xelaev16057926m.g X. laevis.L
JGI 7.1 Xetro.B01524 X. tropicalis
JGI 6.0 XeXenL6RMv10012483m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000012660 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_226000008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260033 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260105 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260003 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2260024 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2260008 X. tropicalis
JGI 4.1 gw1.226.3.1 X. tropicalis
JGI 4.1 gw1.226.110.1 X. tropicalis
JGI 4.1 gw1.226.105.1 X. tropicalis
JGI 4.1 e_gw1.226.3.1 X. tropicalis
JGI 4.1 e_gw1.226.110.1 X. tropicalis
JGI 4.1 e_gw1.226.105.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_226000033 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA20423 X. laevis.S
NCBI 10.1 XBmRNA15619 X. laevis.L
NCBI 10.0 mRNA055298 X. tropicalis
ENSEMBL 10.0 ENSXETT00000053912 X. tropicalis
ENSEMBL 10.0 ENSXETT00000027712 X. tropicalis
Xenbase 9.2 rna84696 X. laevis.L
Xenbase 9.2 rna9245 X. laevis.S
ENSEMBL 9.1 ENSXETT00000053912 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099545 X. tropicalis
Xenbase 9.1 rna61176 X. tropicalis
JGI 9.1 Xelaev18013590m X. laevis.L
JGI 9.1 Xelaev18016053m X. laevis.S
ENSEMBL 9.1 ENSXETT00000027712 X. tropicalis
JGI 8.0 Xetrov14010345m X. tropicalis
JGI 7.2 Xelaev16057926m X. laevis.L
JGI 7.1 Xetro.B01524.2 X. tropicalis
JGI 7.1 Xetro.B01524.1 X. tropicalis
JGI 6.0 XeXenL6RMv10012483m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_226000033 X. tropicalis
JGI 4.1 e_gw1.226.110.1 X. tropicalis
JGI 4.1 e_gw1.226.3.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000027712 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053912 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2260008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260033 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2260024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260105 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_226000008 X. tropicalis
JGI 4.1 e_gw1.226.105.1 X. tropicalis
JGI 4.1 gw1.226.105.1 X. tropicalis
JGI 4.1 gw1.226.110.1 X. tropicalis
JGI 4.1 gw1.226.3.1 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
IMAGE:5384614 BC061414 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
NM_203808 X. tropicalis
XM_012956652 X. tropicalis
XM_012956653 X. tropicalis
XM_012956654 X. tropicalis
XM_012956655 X. tropicalis
IMAGE:6859147 BC070816 X. laevis.L
NM_001091419 X. laevis.L
XM_018244983 X. laevis.L
XM_041582588 X. laevis.L
XM_041582589 X. laevis.L
XM_018250155 X. laevis.S

ESTs (50)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7687436 CX909355 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:5384614 BQ397449 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas031i09 AL647036 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas144e11 AL963510 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas143g21 AL968659 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA043i14 CR434916 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu036b22 AL659851 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7687436 CX909354 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TTbA043i14 CR434917 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas144e11 BX761615 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5384614 BQ397448 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas143g21 BX757334 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8642635 EB731705 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
PBX0080B01 AW639297 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0083A07 AW639452 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4678290 BI477860 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XENOPUS_SOURCE_ID:xlnoc002j12 AW199782 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3401469 BE679189 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6631848 BU906803 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998E228301 BX853405 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5154735 CA791957 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6864563 CA987845 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL215j15 BJ626668 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xlk121f02ex DC042416 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk124b15ex DC043330 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk152h24ex DC052499 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk165j07ex DC065894 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl276d18 DC116468 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl308d11 DC125500 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7979534 DR714794 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7982734 DR720655 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8542333 EB478557 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
XL059c05 BJ058380 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL098j08 BJ072431 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL109h21 BJ073279 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL215j15 BJ643035 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3549208 BG554135 3' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3549208 BG554498 3' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
rxlk152h24ex DC019150 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk165j07ex DC032340 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3401469 BE575618 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XENOPUS_SOURCE_ID:xlnoc002j12 AW199286 3' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XL109h21 BJ090610 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8542333 EC275913 3' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:4783674 BM191753 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4678290 BI347496 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxlk124b15ex DC010216 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3747780 BF025443 3' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XL059c05 BJ076890 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL098j08 BJ089452 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25