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Summary Expression Phenotypes Gene Literature (4) GO Terms (15) Nucleotides (127) Proteins (49) Interactants (91) Wiki
XB-GENEPAGE-856536

Show:     All X. tropicalis X. laevis

Nucleotide sequences for plxnd1 - All

RefSeq mRNAs(3)
Models - Gene (29)
Models - mRNA (35)
mRNAs (5)
ESTs (36)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_002936256 XM_002936256.5 plexin-D1 7626 bp XP_002936302 X. tropicalis
XM_018261363 XM_018261363.2 plexin-D1 7850 bp XP_018116852 X. laevis.S
XM_018259056 XM_018259056.2 plexin-D1 7559 bp XP_018114545 X. laevis.L

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g19944 X. laevis.L
NCBI 10.1 XBXL10_1g22228 X. laevis.S
NCBI 10.0 XBXT10g018808 X. tropicalis
ENSEMBL 10.0 plxnd1 X. tropicalis
Xenbase 9.2 gene3871 X. laevis.L
Xenbase 9.2 gene38117 X. laevis.S
JGI 9.1 Xelaev18023946m.g X. laevis.L
JGI 9.1 Xelaev18025865m.g X. laevis.S
Xenbase 9.1 gene28105 X. tropicalis
ENSEMBL 9.1 plxnd1 X. tropicalis
JGI 7.1 Xetro.D02352 X. tropicalis
JGI 6.0 XeXenL6RMv10017814m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000001467 X. tropicalis
JGI 4.1 e_gw1.196.87.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_196000041 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_196000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_196000040 X. tropicalis
JGI 4.1 e_gw1.196.1.1 X. tropicalis
JGI 4.1 e_gw1.196.55.1 X. tropicalis
JGI 4.1 gw1.196.87.1 X. tropicalis
JGI 4.1 gw1.196.1.1 X. tropicalis
JGI 4.1 gw1.196.55.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1960026 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1960001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1960055 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1960087 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1960040 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1960041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1960008 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA41315 X. laevis.S
NCBI 10.1 XBmRNA36894 X. laevis.L
NCBI 10.0 mRNA092936 X. tropicalis
ENSEMBL 10.0 ENSXETT00000003087 X. tropicalis
Xenbase 9.2 rna11279 X. laevis.L
Xenbase 9.2 rna79154 X. laevis.S
Xenbase 9.1 rna54497 X. tropicalis
JGI 9.1 Xelaev18023946m X. laevis.L
JGI 9.1 Xelaev18025865m X. laevis.S
ENSEMBL 9.1 ENSXETT00000082062 X. tropicalis
ENSEMBL 9.1 ENSXETT00000003091 X. tropicalis
ENSEMBL 9.1 ENSXETT00000003087 X. tropicalis
JGI 7.1 Xetro.D02352.2 X. tropicalis
JGI 7.1 Xetro.D02352.3 X. tropicalis
JGI 7.1 Xetro.D02352.1 X. tropicalis
JGI 6.0 XeXenL6RMv10017814m X. laevis.S
JGI 4.1 estExt_FilteredModels1.C_1960026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1960008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1960041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1960040 X. tropicalis
JGI 4.1 e_gw1.196.87.1 X. tropicalis
JGI 4.1 e_gw1.196.55.1 X. tropicalis
JGI 4.1 e_gw1.196.1.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000056038 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003091 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003087 X. tropicalis
JGI 4.1 gw1.196.87.1 X. tropicalis
JGI 4.1 gw1.196.55.1 X. tropicalis
JGI 4.1 gw1.196.1.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_196000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_196000040 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_196000041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1960087 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1960055 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1960001 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7793465 BC121965 X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7645299 BC168545 X. tropicalis NIH_XGC_tropBrn2 brain frog
XM_002936256 X. tropicalis
XM_018261363 X. laevis.S
XM_018259056 X. laevis.L

ESTs (36)

Clone Accession 5'/3' Species Library Anatomy Stage
CAAO3799 CX934409 5' X. tropicalis NIH_XGC_tropTe5 testis frog
THdA030n18 CR579828 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7588597 CX310087 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7585566 CX318527 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7629779 CX369216 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626124 CX379707 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7615196 CX391533 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT4181 CX400019 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT4424 CX400403 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7640412 CX793830 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644153 CX799629 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645299 CX801651 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645029 CX801776 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646998 CX805532 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7793465 CX846534 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7670041 CX877023 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
THdA024j15 CR577768 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
CAAO3799 CX934408 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7645054 CX801941 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7640412 CX793829 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
THdA024j15 CR577769 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7646998 CX805531 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
THdA030n18 CR579829 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
XZT4181 CX400018 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT4424 CX400402 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7588597 CX310086 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7644153 CX799628 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7670041 CX877022 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7629779 CX369215 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7645299 CX801650 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7626124 CX379706 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7793465 CX846533 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7615196 CX391532 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7645029 CX801775 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:5571721 BQ735127 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5514568 CF287353 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32