Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (3) GO Terms (19) Nucleotides (151) Proteins (48) Interactants (368) Wiki
XB-GENEPAGE-921560

Show:     All X. tropicalis X. laevis

Nucleotide sequences for sema3b - All

RefSeq mRNAs(7)
Models - Gene (21)
Models - mRNA (32)
mRNAs (8)
ESTs (62)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001127436 NM_001127436.1 semaphorin-3B precursor 4980 bp NP_001120908 X. tropicalis
XM_012964329 XM_012964329.3 semaphorin-3B isoform X1 5188 bp XP_012819783 X. tropicalis
XM_031899870 XM_031899870.1 XP_031755730.1 semaphorin-3B isoform X1 5160 bp XP_031755730 X. tropicalis
XM_018261308 XM_018261308.2 semaphorin-3B 4413 bp XP_018116797 X. laevis.S
XM_018258963 XM_018258963.2 semaphorin-3B isoform X2 3489 bp XP_018114452 X. laevis.L
XM_018258964 XM_018258964.2 semaphorin-3B isoform X2 3548 bp XP_018114453 X. laevis.L
XM_041590774 XM_041590774.1 XP_041446708.1 semaphorin-3B isoform X1 3640 bp XP_041446708 X. laevis.L

Models - Gene (21)

Source Version Model Species
NCBI 10.1 XBXL10_1g22146 X. laevis.S
NCBI 10.1 XBXL10_1g19844 X. laevis.L
NCBI 10.0 XBXT10g017458 X. tropicalis
ENSEMBL 10.0 sema3b X. tropicalis
Xenbase 9.2 gene16693 X. laevis.L
Xenbase 9.2 gene4156 X. laevis.S
JGI 9.1 Xelaev18023833m.g X. laevis.L
JGI 9.1 Xelaev18025779m.g X. laevis.S
Xenbase 9.1 gene978 X. tropicalis
ENSEMBL 9.1 sema3b X. tropicalis
JGI 7.1 Xetro.F01808 X. tropicalis
JGI 6.0 XeXenL6RMv10014680m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000007320 X. tropicalis
JGI 4.1 gw1.159.41.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_159000024 X. tropicalis
JGI 4.1 e_gw1.159.41.1 X. tropicalis
JGI 4.1 e_gw1.159.212.1 X. tropicalis
JGI 4.1 e_gw1.159.101.1 X. tropicalis
JGI 4.1 gw1.159.212.1 X. tropicalis
JGI 4.1 gw1.159.101.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_159000080 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.1 XBmRNA36715 X. laevis.L
NCBI 10.1 XBmRNA41176 X. laevis.S
ENSEMBL 10.0 ENSXETT00000015948 X. tropicalis
NCBI 10.0 mRNA086241 X. tropicalis
ENSEMBL 10.0 ENSXETT00000076041 X. tropicalis
ENSEMBL 10.0 ENSXETT00000104694 X. tropicalis
Xenbase 9.2 rna12099 X. laevis.S
Xenbase 9.2 rna48778 X. laevis.L
ENSEMBL 9.1 ENSXETT00000015948 X. tropicalis
JGI 9.1 Xelaev18025779m X. laevis.S
ENSEMBL 9.1 ENSXETT00000104694 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103375 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082304 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080518 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079476 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076041 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074792 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073859 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069799 X. tropicalis
Xenbase 9.1 rna3134 X. tropicalis
JGI 9.1 Xelaev18023833m X. laevis.L
JGI 7.1 Xetro.F01808.1 X. tropicalis
JGI 6.0 XeXenL6RMv10014680m X. laevis.S
JGI 4.1 e_gw1.159.212.1 X. tropicalis
JGI 4.1 e_gw1.159.101.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000015948 X. tropicalis
JGI 4.1 gw1.159.41.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_159000080 X. tropicalis
JGI 4.1 gw1.159.101.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_159000024 X. tropicalis
JGI 4.1 gw1.159.212.1 X. tropicalis
JGI 4.1 e_gw1.159.41.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7682460 BC166183 X. tropicalis
NM_001127436 X. tropicalis
XM_012964329 X. tropicalis
XM_031899870 X. tropicalis
XM_018261308 X. laevis.S
XM_018258963 X. laevis.L
XM_018258964 X. laevis.L
XM_041590774 X. laevis.L

ESTs (62)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA014n18 BX711036 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA017l23 BX713233 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:6980385 CF149484 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA080h05 CR441403 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA028f07 BX730136 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA068n13 CR421594 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA074f01 CR443010 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7586380 CX319687 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7789251 CX334504 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA027g23 CR419888 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7634619 CX338041 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT1473 CX360706 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA004n02 CR564565 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7616105 CX392378 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603469 CX395000 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA048i12 CR422619 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA015c22 CR565701 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA010c16 CR566913 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8921262 EL835643 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
THdA042j07 CR579310 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA075g21 CR429569 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8944558 EG654495 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
CAAO3571 CX933997 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7694121 CX921936 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TTbA048i12 CR422620 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA027g23 CR419889 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA068n13 CR421595 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA075g21 CR429570 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA080h05 CR441404 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA074f01 CR443011 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA004n02 CR564566 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA010c16 CR566914 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA042j07 CR579311 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA017l23 BX713234 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA030h16 BX718237 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA028f07 BX730137 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7586380 CX319686 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7634619 CX338040 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7616105 CX392377 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603469 DR893271 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7789251 DR905053 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7694121 CX921935 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7698224 CX929988 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO3571 CX933996 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8921262 EL835644 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:5516155 CF286492 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5542532 BQ737609 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8644733 EB729592 5' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
XL059o01 BJ058598 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL084b05 BJ065763 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL084f14 BJ065855 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL097a15 BJ073448 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL090j23 BJ074552 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL087i15 BJ075130 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4970734 CF288851 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL087i15 BJ092514 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL059o01 BJ077100 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL077j10 BJ081985 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL084b05 BJ083092 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL084f14 BJ083179 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL090j23 BJ091977 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL097a15 BJ091399 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25