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Summary Expression Phenotypes Gene Literature (16) GO Terms (199) Nucleotides (384) Proteins (54) Interactants (405) Wiki
XB-GENEPAGE-946621

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hif1a - All

RefSeq mRNAs(9)
Models - Gene (24)
Models - mRNA (34)
mRNAs (15)
ESTs (233)

RefSeq mRNAs (9)

Accession Version Protein Name Length Protein Species
NM_001011165 NM_001011165.2 NP_001011165.2 hypoxia-inducible factor 1-alpha 3940 bp NP_001011165 X. tropicalis
NM_001011165 NM_001011165.2 NP_001011165.2 hypoxia-inducible factor 1-alpha 3940 bp NP_001011165 X. tropicalis
XM_031890721 XM_031890721.1 XP_031746581.1 hypoxia-inducible factor 1-alpha 3938 bp XP_031746581 X. tropicalis
NM_001086980 NM_001086980.1 hypoxia inducible factor 1 subunit alpha L homeolog 3710 bp NP_001080449 X. laevis.L
XM_018232015 XM_018232015.2 hypoxia-inducible factor 1-alpha-like isoform X1 3052 bp XP_018087504 X. laevis.S
XM_018232015 hypoxia-inducible factor 1-alpha-like isoform X1 3052 bp XP_018087504 X. laevis.S
XM_018232016 XM_018232016.2 hypoxia-inducible factor 1-alpha-like isoform X3 4197 bp XP_018087505 X. laevis.S
XM_018232016 hypoxia-inducible factor 1-alpha-like isoform X3 4197 bp XP_018087505 X. laevis.S
XM_041574998 XM_041574998.1 XP_041430932.1 hypoxia-inducible factor 1-alpha-like isoform X2 3052 bp XP_041430932 X. laevis.S

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g35992 X. laevis.L
NCBI 10.1 XBXL10_1g37218 X. laevis.S
NCBI 10.0 XBXT10g014028 X. tropicalis
ENSEMBL 10.0 hif1a X. tropicalis
Xenbase 9.2 gene7937 X. laevis.L
JGI 9.1 Xelaev18041137m.g X. laevis.S
JGI 9.1 Xelaev18039792m.g X. laevis.L
Xenbase 9.1 gene8120 X. tropicalis
ENSEMBL 9.1 hif1a X. tropicalis
JGI 7.2 Xelaev16055678m.g X. laevis.L
JGI 7.1 Xetro.H01602 X. tropicalis
JGI 6.0 XeXenL6RMv10032724m.g X. laevis.L
JGI 6.0 XeXenL6RMv10021503m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000014449 X. tropicalis
JGI 4.1 gw1.491.56.1 X. tropicalis
JGI 4.1 gw1.491.46.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_491000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_491000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_491000017 X. tropicalis
JGI 4.1 gw1.491.45.1 X. tropicalis
JGI 4.1 e_gw1.491.56.1 X. tropicalis
JGI 4.1 e_gw1.491.46.1 X. tropicalis
JGI 4.1 e_gw1.491.45.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_491000016 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA68070 X. laevis.L
NCBI 10.1 XBmRNA70218 X. laevis.S
NCBI 10.0 mRNA069451 X. tropicalis
ENSEMBL 10.0 ENSXETT00000097753 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103914 X. tropicalis
ENSEMBL 10.0 ENSXETT00000031610 X. tropicalis
Xenbase 9.2 rna23149 X. laevis.L
JGI 9.1 Xelaev18039792m X. laevis.L
ENSEMBL 9.1 ENSXETT00000096631 X. tropicalis
ENSEMBL 9.1 ENSXETT00000031610 X. tropicalis
ENSEMBL 9.1 ENSXETT00000062123 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077455 X. tropicalis
Xenbase 9.1 rna26217 X. tropicalis
JGI 9.1 Xelaev18041137m X. laevis.S
ENSEMBL 9.1 ENSXETT00000081407 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097753 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100203 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087962 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103914 X. tropicalis
JGI 7.2 Xelaev16055678m X. laevis.L
JGI 7.1 Xetro.H01602.1 X. tropicalis
JGI 6.0 XeXenL6RMv10032724m X. laevis.L
JGI 6.0 XeXenL6RMv10021503m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_491000016 X. tropicalis
JGI 4.1 e_gw1.491.46.1 X. tropicalis
JGI 4.1 e_gw1.491.56.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031610 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_491000004 X. tropicalis
JGI 4.1 e_gw1.491.45.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_491000017 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_491000006 X. tropicalis
JGI 4.1 gw1.491.45.1 X. tropicalis
JGI 4.1 gw1.491.46.1 X. tropicalis
JGI 4.1 gw1.491.56.1 X. tropicalis

mRNAs from cDNA libraries (15)

Clone Accession Species Library Anatomy Stage
IMAGE:6977286 BC084989 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas142k12 CT030482 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001011165 X. tropicalis
XM_031890721 X. tropicalis
IMAGE:4930371 BC043769 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001086980 X. laevis.L
AY189821 X. laevis.S
IMAGE:4056279 BC126005 X. laevis.S
DQ529235 X. laevis.S
NM_001092957 X. laevis.S
XM_018232015 X. laevis.S
XM_018232015 X. laevis.S
XM_018232016 X. laevis.S
XM_018232016 X. laevis.S
XM_041574998 X. laevis.S

ESTs (233)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu069o01 BX683229 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xthr21D17 CN103646 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8855632 EL818430 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
xthr43O10 CN115849 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA011f07 BX704092 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7742616 DN035014 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
TTpA003p16 BX705068 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7736467 DN023204 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
TTpA012m20 BX706368 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA020e09 BX711943 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8929104 EL677943 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
TTpA017p10 BX714577 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7579376 CX418358 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA072a17 BX718840 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7578005 CX423972 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA054m20 BX724061 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8923789 EL667664 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
TTpA031h21 BX725383 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7533788 CX427677 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA027d08 BX731986 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7534041 CX428087 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA076k07 BX734209 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8933032 EL641913 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
TTpA043l02 BX739933 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7527363 CX444481 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7527092 CX444746 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8936846 EL639249 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
TTpA033g13 BX745075 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7537949 CX446890 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7586908 CX312593 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7588207 CX314663 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7588473 CX314842 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7806091 DR842425 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7785963 CX317154 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7586196 CX319723 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7586859 CX319944 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7543254 CX459075 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XZT13833 CX322407 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7594880 CX332126 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7541307 CX463083 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7595310 CX335164 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7621819 CX342125 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7804681 DR839912 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7622093 CX342635 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7564945 CX475542 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7599611 CX343885 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7752585 DN053068 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7618354 CX363054 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7628752 CX382894 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7639429 CX384897 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7519229 CX478496 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7750479 DN049180 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7555373 CX501990 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas024k13 AL627498 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7559646 CX514650 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas012i17 AL629256 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7734523 DN019439 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7715407 CX974944 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7699133 CX931714 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7698217 CX929942 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAN11370 CX927161 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688932 CX912271 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7667363 CX853864 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7655076 CX825133 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8866454 EL704634 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
xtbs08L15 CN093748 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs08G24 CN093545 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs18C01 CN080447 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7621507 DR898695 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6981513 CF222276 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6981513 CF222277 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7604728 CX411892 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609030 CX410393 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7608245 CX409016 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636246 CX406542 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636402 CX406358 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7612676 CX405234 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas018g16 AL629472 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7515965 CX746832 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:6993801 CF237762 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TNeu024i08 AL642308 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu014p10 AL643464 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu017i18 AL645248 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu049e03 AL659833 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu036e15 AL661436 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu053h09 AL674200 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu069o01 AL780802 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu071e01 AL784600 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu137h19 AL785872 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu108m03 AL793328 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu121f23 AL793924 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu127m21 AL795398 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu140h19 AL800971 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu093h20 AL804241 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas018e15 AL633726 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
L1G2e09 AL643695 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas056a01 AL672327 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas069a12 AL683719 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas106j21 AL958944 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12