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Summary Expression Phenotypes Gene Literature (30) GO Terms (97) Nucleotides (216) Proteins (54) Interactants (226) Wiki
XB-GENEPAGE-952813

Show:     All X. tropicalis X. laevis

Nucleotide sequences for prnp - All

RefSeq mRNAs(12)
Models - Gene (23)
Models - mRNA (26)
mRNAs (17)
ESTs (92)

RefSeq mRNAs (12)

Accession Version Protein Name Length Protein Species
NM_001127942 NM_001127942.1 prion protein precursor 675 bp NP_001121414 X. tropicalis
XM_012966116 XM_012966116.3 prion protein isoform X1 3290 bp XP_012821570 X. tropicalis
XM_012966117 XM_012966117.3 prion protein isoform X2 3573 bp XP_012821571 X. tropicalis
XM_012966118 XM_012966118.3 prion protein isoform X2 3514 bp XP_012821572 X. tropicalis
XM_031897659 XM_031897659.1 XP_031753519.1 prion protein isoform X2 3286 bp XP_031753519 X. tropicalis
NM_001092722 NM_001092722.1 prion protein S homeolog precursor 3634 bp NP_001086191 X. laevis.S
XM_018254266 XM_018254266.2 prion protein S homeolog isoform X1 3719 bp XP_018109755 X. laevis.S
XM_018254267 XM_018254267.2 prion protein S homeolog isoform X1 3978 bp XP_018109756 X. laevis.S
NM_001088711 NM_001088711.1 prion protein L homeolog precursor 847 bp NP_001082180 X. laevis.L
XM_018250816 XM_018250816.2 prion protein L homeolog isoform X1 4316 bp XP_018106305 X. laevis.L
XM_018250817 XM_018250817.2 prion protein L homeolog isoform X1 4333 bp XP_018106306 X. laevis.L
XM_018250818 XM_018250818.2 prion protein L homeolog isoform X1 4258 bp XP_018106307 X. laevis.L

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g15454 X. laevis.S
NCBI 10.1 XBXL10_1g13522 X. laevis.L
NCBI 10.0 XBXT10g015722 X. tropicalis
ENSEMBL 10.0 prnp X. tropicalis
Xenbase 9.2 gene36949 X. laevis.L
Xenbase 9.2 gene9557 X. laevis.S
JGI 9.1 Xelaev18018565m.g X. laevis.L
JGI 9.1 Xelaev18020329m.g X. laevis.S
Xenbase 9.1 gene6617 X. tropicalis
ENSEMBL 9.1 prnp X. tropicalis
JGI 8.0 Xetrov14012797m.g X. tropicalis
JGI 7.2 Xelaev16057034m.g X. laevis.S
JGI 7.1 Xetro.G00459 X. tropicalis
JGI 6.0 XeXenL6RMv10018288m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000016850 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_143000053 X. tropicalis
JGI 4.1 e_gw1.143.129.1 X. tropicalis
JGI 4.1 e_gw1.143.132.1 X. tropicalis
JGI 4.1 gw1.143.132.1 X. tropicalis
JGI 4.1 gw1.143.129.1 X. tropicalis
JGI 4.1 gw1.143.125.1 X. tropicalis
JGI 4.1 e_gw1.143.125.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_143000022 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.1 XBmRNA25701 X. laevis.L
NCBI 10.1 XBmRNA28873 X. laevis.S
ENSEMBL 10.0 ENSXETT00000112587 X. tropicalis
ENSEMBL 10.0 ENSXETT00000104086 X. tropicalis
ENSEMBL 10.0 ENSXETT00000036722 X. tropicalis
NCBI 10.0 mRNA077761 X. tropicalis
Xenbase 9.2 rna77502 X. laevis.L
Xenbase 9.2 rna27825 X. laevis.S
JGI 9.1 Xelaev18018565m X. laevis.L
JGI 9.1 Xelaev18020329m X. laevis.S
ENSEMBL 9.1 ENSXETT00000036722 X. tropicalis
Xenbase 9.1 rna21368 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104086 X. tropicalis
JGI 8.0 Xetrov14012797m X. tropicalis
JGI 7.2 Xelaev16057034m X. laevis.S
JGI 7.1 Xetro.G00459.1 X. tropicalis
JGI 6.0 XeXenL6RMv10018288m X. laevis.S
JGI 4.1 gw1.143.132.1 X. tropicalis
JGI 4.1 e_gw1.143.129.1 X. tropicalis
JGI 4.1 e_gw1.143.132.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000036722 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_143000053 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_143000022 X. tropicalis
JGI 4.1 gw1.143.125.1 X. tropicalis
JGI 4.1 gw1.143.129.1 X. tropicalis
JGI 4.1 e_gw1.143.125.1 X. tropicalis

mRNAs from cDNA libraries (17)

Clone Accession Species Library Anatomy Stage
IMAGE:8914481 BC166114 X. tropicalis NICHD_XGC_tropTe1 testis frog
NM_001127942 X. tropicalis
XM_012966116 X. tropicalis
XM_012966117 X. tropicalis
XM_012966118 X. tropicalis
XM_031897659 X. tropicalis
IMAGE:6950143 BC074307 X. laevis.S
NM_001092722 X. laevis.S
XM_018254266 X. laevis.S
XM_018254267 X. laevis.S
AJ320186 X. laevis.L
AY788895 X. laevis.L
IMAGE:6639760 BC094089 X. laevis.L
NM_001088711 X. laevis.L
XM_018250816 X. laevis.L
XM_018250817 X. laevis.L
XM_018250818 X. laevis.L

ESTs (92)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7654266 CX823745 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8854581 EL816518 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7655043 CX824892 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7631583 CX397201 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7655775 CX826410 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7714807 CX973728 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7655866 CX826729 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
CAAN11193 CX926826 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7656465 CX827605 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8853467 EL814908 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7657820 CX830177 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659565 CX839560 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7661062 CX842124 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
xtbs28K08 CN087275 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7661114 CX842856 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7853390 DT394265 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7662904 CX845446 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
xtbs29O21 CN087841 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7663109 CX845907 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7663165 CX845968 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8911650 EL808045 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7663302 CX846268 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7793389 CX846681 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7644629 CX800968 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7667893 CX854529 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
CABC9372 DR840525 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7671163 CX878840 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7648400 CX808009 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7686439 CX907671 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7696252 CX925664 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA063n11 BX719100 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7652019 CX814540 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:9015023 EL861428 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7652434 CX815457 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
XZT11656 CX311989 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7652374 CX820358 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7785292 CX316252 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7653274 CX821712 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8887505 EL845374 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7653441 CX821884 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7596947 CX337415 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7653624 CX822544 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8914481 EL827086 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7653783 CX822657 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7622279 CX342923 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7853390 DT394264 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8911650 EL808046 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
XZT11656 CX311988 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7596947 CX337414 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7622279 CX342922 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7631583 CX397200 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs28K08 CN087274 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs29O21 CN087840 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7644629 CX800967 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648400 CX808008 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7652019 CX814539 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7652434 CX815456 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7652374 CX820357 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653274 CX821711 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653441 CX821883 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653624 CX822543 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653783 CX822656 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7654266 CX823744 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7655043 CX824891 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7655775 CX826409 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7655866 CX826728 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7656465 CX827604 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7657820 CX830176 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7661114 CX842855 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7662904 CX845445 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7663109 CX845906 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7663302 CX846267 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7667893 CX854528 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7671163 CX878839 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7686439 CX907670 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7714807 CX973727 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
CABC9372 DR840524 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8854581 EL816519 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8887505 EL845375 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9015023 EL861429 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGp998P0512311 BX849516 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4960380 BM192060 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8538866 EB462960 5' X. laevis.S NICHD_XGC_olfb brain unspecified stage
IMAGE:5570164 BQ736851 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
PBX0078D12 AW639096 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:8537689 EB473731 5' X. laevis.S NICHD_XGC_olfb brain unspecified stage
IMAGE:8538192 EB470676 5' X. laevis.S NICHD_XGC_olfb brain unspecified stage
IMAGE:8533298 EB465862 5' X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL069e06 BJ062854 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6937737 CD101211 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL020i20 BJ048659 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL069e06 BJ080792 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25