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Summary Expression Phenotypes Gene Literature (26) GO Terms (38) Nucleotides (2415) Proteins (70) Interactants (329) Wiki
XB-GENEPAGE-963456

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pabpc1 - All

RefSeq mRNAs(6)
Models - Gene (30)
Models - mRNA (49)
mRNAs (14)
ESTs (1886)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001005051 NM_001005051.1 polyadenylate-binding protein 1 2740 bp NP_001005051 X. tropicalis
XM_031903314 XM_031903314.1 XP_031759174.1 polyadenylate-binding protein 1 isoform X1 2628 bp XP_031759174 X. tropicalis
XM_041567947 XM_041567947.1 XP_041423881.1 polyadenylate-binding protein 1-A 2772 bp XP_041423881 X. laevis.S
XM_041567948 XM_041567948.1 XP_041423882.1 polyadenylate-binding protein 1-A 2384 bp XP_041423882 X. laevis.S
NM_001091600 NM_001091600.1 polyadenylate-binding protein 1-B 2736 bp NP_001085069 X. laevis.L
XM_041565402 XM_041565402.1 XP_041421336.1 polyadenylate-binding protein 1-B isoform X1 2565 bp XP_041421336 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g29722 X. laevis.S
NCBI 10.1 XBXL10_1g28210 X. laevis.L
NCBI 10.0 XBXT10g011193 X. tropicalis
ENSEMBL 10.0 pabpc1 X. tropicalis
Xenbase 9.2 gene2750 X. laevis.S
Xenbase 9.2 gene6255 X. laevis.L
JGI 9.1 Xelaev18033915m.g X. laevis.S
JGI 9.1 Xelaev18032252m.g X. laevis.L
Xenbase 9.1 gene5142 X. tropicalis
ENSEMBL 9.1 pabpc1 X. tropicalis
JGI 7.2 Xelaev16045098m.g X. laevis.S
JGI 7.2 Xelaev16017620m.g X. laevis.L
JGI 7.1 Xetro.F00238 X. tropicalis
JGI 6.0 XeXenL6RMv10012630m.g X. laevis.L
JGI 6.0 XeXenL6RMv10009994m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000006635 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_30005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_30013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_30445 X. tropicalis
JGI 4.1 estExt_Genewise1.C_30278 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_3000013 X. tropicalis
JGI 4.1 gw1.3.445.1 X. tropicalis
JGI 4.1 gw1.3.278.1 X. tropicalis
JGI 4.1 gw1.3.277.1 X. tropicalis
JGI 4.1 e_gw1.3.445.1 X. tropicalis
JGI 4.1 e_gw1.3.278.1 X. tropicalis
JGI 4.1 e_gw1.3.277.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_30012 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_3000005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_30277 X. tropicalis

mRNAs based on gene models(49)

Source Version Model Species
NCBI 10.1 XBmRNA55931 X. laevis.S
NCBI 10.1 XBmRNA52970 X. laevis.L
NCBI 10.0 mRNA055567 X. tropicalis
ENSEMBL 10.0 ENSXETT00000033285 X. tropicalis
ENSEMBL 10.0 ENSXETT00000056914 X. tropicalis
ENSEMBL 10.0 ENSXETT00000014537 X. tropicalis
Xenbase 9.2 rna8006 X. laevis.S
Xenbase 9.2 rna18294 X. laevis.L
ENSEMBL 9.1 ENSXETT00000075020 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075516 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086197 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089772 X. tropicalis
JGI 9.1 Xelaev18033915m X. laevis.S
Xenbase 9.1 rna16737 X. tropicalis
JGI 9.1 Xelaev18032252m X. laevis.L
ENSEMBL 9.1 ENSXETT00000014537 X. tropicalis
ENSEMBL 9.1 ENSXETT00000033285 X. tropicalis
ENSEMBL 9.1 ENSXETT00000056914 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067495 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069996 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074344 X. tropicalis
JGI 7.2 Xelaev16045098m X. laevis.S
JGI 7.2 Xelaev16017620m X. laevis.L
JGI 7.1 Xetro.F00238.7 X. tropicalis
JGI 7.1 Xetro.F00238.1 X. tropicalis
JGI 7.1 Xetro.F00238.2 X. tropicalis
JGI 7.1 Xetro.F00238.3 X. tropicalis
JGI 7.1 Xetro.F00238.4 X. tropicalis
JGI 7.1 Xetro.F00238.5 X. tropicalis
JGI 7.1 Xetro.F00238.6 X. tropicalis
JGI 7.1 Xetro.F00238.8 X. tropicalis
JGI 7.1 Xetro.F00238.9 X. tropicalis
JGI 6.0 XeXenL6RMv10012630m X. laevis.L
JGI 6.0 XeXenL6RMv10009994m X. laevis.S
ENSEMBL 4.1 ENSXETT00000014537 X. tropicalis
JGI 4.1 e_gw1.3.445.1 X. tropicalis
JGI 4.1 e_gw1.3.277.1 X. tropicalis
JGI 4.1 e_gw1.3.278.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_30278 X. tropicalis
JGI 4.1 estExt_Genewise1.C_30277 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_3000005 X. tropicalis
JGI 4.1 gw1.3.277.1 X. tropicalis
JGI 4.1 gw1.3.278.1 X. tropicalis
JGI 4.1 gw1.3.445.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_3000013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_30445 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_30012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_30005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_30013 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
IMAGE:7016946 BC076931 X. tropicalis NICHD_XGC_Swb1 whole organism frog
TEgg006b10 CT025226 X. tropicalis
NM_001005051 X. tropicalis
XM_031903314 X. tropicalis
IMAGE:5542430 BC052100 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
M27072 X. laevis.S
NM_001086735 X. laevis.S
XM_041567947 X. laevis.S
XM_041567948 X. laevis.S
IMAGE:5542477 BC050949 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4885213 BC072110 X. laevis.L NICHD_XGC_Emb2 whole organism NF stage 17 to NF stage 19
IMAGE:7976412 BC108462 X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
NM_001091600 X. laevis.L
XM_041565402 X. laevis.L

ESTs (1886)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu075e04 BX683525 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7546609 CX499463 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas129o16 AL965433 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7555002 CX501743 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5308028 BQ389743 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7556409 CX504162 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556322 CX504543 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557532 CX506254 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr30F03 CN107637 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7550674 CX509594 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas111k12 AL959894 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7572211 CX513774 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5308212 BQ389825 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7517291 CX748599 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
xthr37F18 CN111917 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7517691 CX748966 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7518304 CX750482 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7518634 CX750970 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7795437 CX780040 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TGas122k19 AL966751 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xthr38K05 CN112118 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7650885 CX811972 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:5308625 BQ391093 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7652344 CX815496 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
xthr39D17 CN112964 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7653640 CX822304 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653775 CX822598 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas116o14 AL967311 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7654399 CX823321 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:5309061 BQ391830 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7655710 CX826632 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
xthr40A13 CN113776 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7660297 CX840366 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660749 CX841571 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
xthr41M18 CN114639 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7662043 CX843684 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas112j03 AL968060 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7663953 CX847837 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
xthr41L07 CN114754 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7666244 CX852432 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7667387 CX854016 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:5309139 BQ392374 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7674413 CX884112 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
xthr41F14 CN114862 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CAAO7265 CX940685 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas086m16 AL969348 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO7476 CX941064 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xthr42N13 CN115373 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CAAO8206 CX942415 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:5309251 BQ392431 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
CAAO8289 CX955679 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xthr44A12 CN116290 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CAAO8367 CX955825 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xthr46A05 CN117146 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CAAO8571 CX956202 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xthr04P03 CN117882 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CAAO9458 CX957840 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xthr01D07 CN119457 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CAAO9538 CX957988 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xthr03O05 CN119968 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7706609 CX958397 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xthr03G24 CN120023 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7706490 CX958574 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTbA003e24 CR409696 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7706793 CX959048 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTbA002b14 CR410399 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7706772 CX959237 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTpA004j24 BX705927 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7708286 CX961559 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTbA006a18 CR413319 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7708330 CX962239 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTpA012p24 BX707241 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7708795 CX962498 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTbA064d08 CR413815 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7708759 CX962588 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTpA008d16 BX707605 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7708723 CX962670 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTbA008d04 CR414260 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
CAAO12341 CX963184 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTpA002m15 BX708098 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7711639 CX968155 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TTbA014i16 CR414883 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7711640 CX968494 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
THdA031d23 CR571409 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7713614 CX972035 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TGas092d18 AL969416 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7714336 CX973439 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TTpA009m01 BX709218 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7715724 CX976190 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
THdA028f03 CR572477 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7717354 CX978939 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
THdA033b15 CR573153 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7718702 CX981766 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:5384942 BQ392915 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
THdA023d14 CR574505 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA012j01 BX709601 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA024k11 CR575100 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas119n15 AL970455 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
THdA037b10 CR575357 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30