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Summary Expression Phenotypes Gene Literature (15) GO Terms (2) Nucleotides (126) Proteins (41) Interactants (228) Wiki
XB-GENEPAGE-963584

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ism1 - All

RefSeq mRNAs(4)
Models - Gene (25)
Models - mRNA (28)
mRNAs (6)
ESTs (31)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
XM_002931740 XM_002931740.5 isthmin-1 2855 bp XP_002931786 X. tropicalis
NM_001088759 NM_001088759.1 isthmin precursor 1350 bp NP_001082228 X. laevis.L
XM_018261732 XM_018261732.1 isthmin isoform X1 3237 bp XP_018117221 X. laevis.L
XM_018261733 XM_018261733.2 isthmin isoform X2 3003 bp XP_018117222 X. laevis.L

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g22841 X. laevis.L
NCBI 10.0 XBXT10g001765 X. tropicalis
ENSEMBL 10.0 ncoa1 X. tropicalis
Xenbase 9.2 gene7162 X. laevis.L
JGI 9.1 Xelaev18026456m.g X. laevis.L
Xenbase 9.1 gene23061 X. tropicalis
ENSEMBL 9.1 ism1 X. tropicalis
JGI 8.0 Xetrov14024094m.g X. tropicalis
JGI 7.2 Xelaev16005390m.g X. laevis.L
JGI 7.1 Xetro.E01378 X. tropicalis
JGI 6.0 XeXenL6RMv10011617m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000008081 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_8000032 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_80011 X. tropicalis
JGI 4.1 e_gw1.8.176.1 X. tropicalis
JGI 4.1 e_gw1.8.218.1 X. tropicalis
JGI 4.1 e_gw1.8.76.1 X. tropicalis
JGI 4.1 gw1.8.176.1 X. tropicalis
JGI 4.1 gw1.8.218.1 X. tropicalis
JGI 4.1 gw1.8.76.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_80023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_80076 X. tropicalis
JGI 4.1 estExt_Genewise1.C_80218 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_80032 X. tropicalis
JGI 4.1 estExt_Genewise1.C_80176 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.1 XBmRNA42557 X. laevis.L
ENSEMBL 10.0 ENSXETT00000017707 X. tropicalis
ENSEMBL 10.0 ENSXETT00000079776 X. tropicalis
NCBI 10.0 mRNA008905 X. tropicalis
Xenbase 9.2 rna20899 X. laevis.L
Xenbase 9.1 rna46427 X. tropicalis
JGI 9.1 Xelaev18026456m X. laevis.L
ENSEMBL 9.1 ENSXETT00000079776 X. tropicalis
ENSEMBL 9.1 ENSXETT00000017707 X. tropicalis
JGI 8.0 Xetrov14024094m X. tropicalis
JGI 7.2 Xelaev16005390m X. laevis.L
JGI 7.1 Xetro.E01378.1 X. tropicalis
JGI 7.1 Xetro.E01378.2 X. tropicalis
JGI 6.0 XeXenL6RMv10011617m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_80032 X. tropicalis
JGI 4.1 e_gw1.8.76.1 X. tropicalis
JGI 4.1 e_gw1.8.218.1 X. tropicalis
JGI 4.1 e_gw1.8.176.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000017707 X. tropicalis
JGI 4.1 gw1.8.76.1 X. tropicalis
JGI 4.1 gw1.8.218.1 X. tropicalis
JGI 4.1 gw1.8.176.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_80218 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_8000032 X. tropicalis
JGI 4.1 estExt_Genewise1.C_80176 X. tropicalis
JGI 4.1 estExt_Genewise1.C_80076 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_80023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_80011 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
XM_002931740 X. tropicalis
AY091635 X. laevis.L
IMAGE:4888159 BC160753 X. laevis.L NICHD_XGC_Emb2 whole organism NF stage 17 to NF stage 19
NM_001088759 X. laevis.L
XM_018261732 X. laevis.L
XM_018261733 X. laevis.L

ESTs (31)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA051b09 BX726085 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8920436 EL834958 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9012657 EL858126 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7512923 CX742023 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TGas006k24 AL594356 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas111h12 AL965659 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7527796 CX445191 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu094p14 AL786782 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu119p13 AL792423 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA016b21 CR562225 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7512923 CX742022 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:8920436 EL834959 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
THdA016b21 CR562226 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
XL012j15 BJ029483 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4782989 BI449830 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL065c05 BJ060213 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL085g17 BJ066195 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xl314b05 DC127257 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3420825 BG551835 5' X. laevis.L Wellcome CRC pSK St 10 5 whole organism NF stage 10.5
IMAGE:3402152 BG037854 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3473750 BG162342 5' X. laevis.L Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
IMAGE:6938566 CD100827 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL085g17 BJ083518 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4782989 BI450332 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3402152 BG019895 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3473750 BG160792 3' X. laevis.L Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
IMAGE:3420825 BG408123 3' X. laevis.L Wellcome CRC pSK St 10 5 whole organism NF stage 10.5
rxl314b05 DC092142 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL012j15 BJ044213 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL065c05 BJ078437 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3379459 BF049563 3' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage