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Summary Expression Phenotypes Gene Literature (16) GO Terms (23) Nucleotides (78) Proteins (58) Interactants (145) Wiki
XB-GENEPAGE-963930

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cald1 - All

RefSeq mRNAs(13)
Models - Gene (17)
Models - mRNA (23)
mRNAs (18)
ESTs (4)

RefSeq mRNAs (13)

Accession Version Protein Name Length Protein Species
XM_004912793 XM_004912793.4 caldesmon isoform X1 5733 bp XP_004912850 X. tropicalis
XM_004912794 XM_004912794.3 caldesmon isoform X1 5582 bp XP_004912851 X. tropicalis
XM_004912797 XM_004912797.4 caldesmon isoform X2 5468 bp XP_004912854 X. tropicalis
NM_001246315 NM_001246315.1 caldesmon 1 L homeolog 1793 bp NP_001233244 X. laevis.L
XM_041584839 XM_041584839.1 XP_041440773.1 non-muscle caldesmon isoform X1 6191 bp XP_041440773 X. laevis.L
XM_041584840 XM_041584840.1 XP_041440774.1 non-muscle caldesmon isoform X1 5750 bp XP_041440774 X. laevis.L
XM_041584841 XM_041584841.1 XP_041440775.1 non-muscle caldesmon isoform X2 5732 bp XP_041440775 X. laevis.L
XM_041584842 XM_041584842.1 XP_041440776.1 non-muscle caldesmon isoform X3 5178 bp XP_041440776 X. laevis.L
XM_018254867 XM_018254867.2 caldesmon isoform X3 3943 bp XP_018110356 X. laevis.S
XM_018254869 XM_018254869.2 non-muscle caldesmon isoform X4 2776 bp XP_018110358 X. laevis.S
XM_041587973 XM_041587973.1 XP_041443907.1 caldesmon isoform X1 3571 bp XP_041443907 X. laevis.S
XM_041587974 XM_041587974.1 XP_041443908.1 caldesmon isoform X2 3520 bp XP_041443908 X. laevis.S
XM_041587975 XM_041587975.1 XP_041443909.1 caldesmon isoform X3 4212 bp XP_041443909 X. laevis.S

Models - Gene (17)

Source Version Model Species
NCBI 10.0 XBXT10g017965 X. tropicalis
NCBI 10.1 XBXL10_1g15115 X. laevis.S
NCBI 10.1 XBXL10_1g12044 X. laevis.L
ENSEMBL 10.0 cald1 X. tropicalis
Xenbase 9.1 gene33648 X. tropicalis
ENSEMBL 9.1 cald1 X. tropicalis
JGI 7.1 Xetro.C01138 X. tropicalis
ENSEMBL 4.1 ENSXETG00000023618 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_24000057 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_24000117 X. tropicalis
JGI 4.1 e_gw1.24.758.1 X. tropicalis
JGI 4.1 e_gw1.24.759.1 X. tropicalis
JGI 4.1 gw1.24.758.1 X. tropicalis
JGI 4.1 gw1.24.759.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_240171 X. tropicalis
JGI 4.1 estExt_Genewise1.C_240758 X. tropicalis
JGI 4.1 estExt_Genewise1.C_240759 X. tropicalis

mRNAs based on gene models(23)

Source Version Model Species
NCBI 10.1 XBmRNA28187 X. laevis.S
NCBI 10.1 XBmRNA22465 X. laevis.L
ENSEMBL 10.0 ENSXETT00000118912 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120927 X. tropicalis
NCBI 10.0 mRNA088717 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110215 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110511 X. tropicalis
ENSEMBL 10.0 ENSXETT00000050960 X. tropicalis
ENSEMBL 10.0 ENSXETT00000108955 X. tropicalis
Xenbase 9.1 rna63378 X. tropicalis
ENSEMBL 9.1 ENSXETT00000050960 X. tropicalis
JGI 7.1 Xetro.C01138.2 X. tropicalis
JGI 7.1 Xetro.C01138.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_240758 X. tropicalis
JGI 4.1 e_gw1.24.759.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000050960 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_240171 X. tropicalis
JGI 4.1 e_gw1.24.758.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_240759 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_24000117 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_24000057 X. tropicalis
JGI 4.1 gw1.24.758.1 X. tropicalis
JGI 4.1 gw1.24.759.1 X. tropicalis

mRNAs from cDNA libraries (18)

Clone Accession Species Library Anatomy Stage
IMAGE:7609373 BC135536 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7733112 BC154846 X. tropicalis
XM_004912793 X. tropicalis
XM_004912794 X. tropicalis
XM_004912797 X. tropicalis
HQ880575 X. laevis.L
NM_001246315 X. laevis.L
XM_041584839 X. laevis.L
XM_041584840 X. laevis.L
XM_041584841 X. laevis.L
XM_041584842 X. laevis.L
IMAGE:5512075 BC073322 X. laevis.S
IMAGE:7297021 BC133794 X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XM_018254867 X. laevis.S
XM_018254869 X. laevis.S
XM_041587973 X. laevis.S
XM_041587974 X. laevis.S
XM_041587975 X. laevis.S

ESTs (4)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7656076 CX827209 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8914030 EL826621 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TTbA031c16 CR441954 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8914030 EL826622 3' X. tropicalis NICHD_XGC_tropTe1 testis frog