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Summary Expression Phenotypes Gene Literature (0) GO Terms (9) Nucleotides (162) Proteins (45) Interactants (15) Wiki
XB-GENEPAGE-965953

Show:     All X. tropicalis X. laevis

Nucleotide sequences for gatad1 - All

RefSeq mRNAs(7)
Models - Gene (26)
Models - mRNA (29)
mRNAs (10)
ESTs (62)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001170506 NM_001170506.1 GATA zinc finger domain-containing protein 1 2297 bp NP_001163977 X. tropicalis
NM_001087134 NM_001087134.1 GATA zinc finger domain-containing protein 1 1689 bp NP_001080603 X. laevis.L
XM_018266279 XM_018266279.2 GATA zinc finger domain-containing protein 1 isoform X1 1716 bp XP_018121768 X. laevis.L
XM_018266280 XM_018266280.2 GATA zinc finger domain-containing protein 1 isoform X1 2141 bp XP_018121769 X. laevis.L
XM_018266281 XM_018266281.2 GATA zinc finger domain-containing protein 1 isoform X1 1766 bp XP_018121770 X. laevis.L
XM_018266282 XM_018266282.2 GATA zinc finger domain-containing protein 1 isoform X1 1672 bp XP_018121771 X. laevis.L
XM_041565284 XM_041565284.1 XP_041421218.1 GATA zinc finger domain-containing protein 1 isoform X1 2192 bp XP_041421218 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g26939 X. laevis.L
NCBI 10.0 XBXT10g004720 X. tropicalis
ENSEMBL 10.0 gatad1 X. tropicalis
Xenbase 9.2 gene16875 X. laevis.L
JGI 9.1 Xelaev18030860m.g X. laevis.L
Xenbase 9.1 gene3159 X. tropicalis
ENSEMBL 9.1 gatad1 X. tropicalis
JGI 8.0 Xetrov14027491m.g X. tropicalis
JGI 7.2 Xelaev16065943m.g X. laevis.L
JGI 7.1 Xetro.F01479 X. tropicalis
JGI 6.0 XeXenL6RMv10004267m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000018528 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1040100 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_104000044 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_104000012 X. tropicalis
JGI 4.1 e_gw1.104.100.1 X. tropicalis
JGI 4.1 e_gw1.104.116.1 X. tropicalis
JGI 4.1 e_gw1.104.156.1 X. tropicalis
JGI 4.1 gw1.104.100.1 X. tropicalis
JGI 4.1 gw1.104.116.1 X. tropicalis
JGI 4.1 gw1.104.156.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1040025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1040116 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1040153 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1040011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1040043 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.1 XBmRNA50453 X. laevis.L
ENSEMBL 10.0 ENSXETT00000040101 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083581 X. tropicalis
NCBI 10.0 mRNA023434 X. tropicalis
Xenbase 9.2 rna49318 X. laevis.L
Xenbase 9.1 rna10334 X. tropicalis
JGI 9.1 Xelaev18030860m X. laevis.L
ENSEMBL 9.1 ENSXETT00000083581 X. tropicalis
ENSEMBL 9.1 ENSXETT00000040101 X. tropicalis
JGI 8.0 Xetrov14027491m X. tropicalis
JGI 7.2 Xelaev16065943m X. laevis.L
JGI 7.1 Xetro.F01479.1 X. tropicalis
JGI 7.1 Xetro.F01479.2 X. tropicalis
JGI 6.0 XeXenL6RMv10004267m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_1040043 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1040011 X. tropicalis
JGI 4.1 e_gw1.104.156.1 X. tropicalis
JGI 4.1 e_gw1.104.116.1 X. tropicalis
JGI 4.1 e_gw1.104.100.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000040101 X. tropicalis
JGI 4.1 gw1.104.156.1 X. tropicalis
JGI 4.1 gw1.104.116.1 X. tropicalis
JGI 4.1 gw1.104.100.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_104000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_104000044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1040153 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1040116 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1040100 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1040025 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:7708182 BC161128 X. tropicalis NIH_XGC_tropTe5 testis frog
TTbA066h11 CU075374 X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
NM_001170506 X. tropicalis
IMAGE:4681316 BC044066 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001087134 X. laevis.L
XM_018266279 X. laevis.L
XM_018266280 X. laevis.L
XM_018266281 X. laevis.L
XM_018266282 X. laevis.L
XM_041565284 X. laevis.L

ESTs (62)

Clone Accession 5'/3' Species Library Anatomy Stage
CAAO9529 CX957971 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7527969 CX424578 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526344 CX443790 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539395 CX452217 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu026h21 AL641008 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA078m22 CR437344 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA066h11 CR449120 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA023l10 CR574559 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA025d21 CR577679 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA051m07 CR588915 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA023g19 BX713715 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA067k07 BX741340 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7786175 CX317285 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7463102 CV632394 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
CAAN11448 CX927306 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7708182 CX961501 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8855048 EL817271 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8855515 EL818030 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8855946 EL818859 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8884301 EL840289 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8855946 EL818860 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8855048 EL817272 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8855515 EL818031 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
TTpA067k07 BX741341 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7786175 CX317284 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8884301 EL840290 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
THdA051m07 CR588916 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA023l10 CR574560 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA066h11 CR449121 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA023j09 CR574415 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7708182 CX961500 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8321477 DY562016 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:6938840 CD099894 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
PBX0107A03 AW641488 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0125H11 AW643183 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3301393 BE132317 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0063D01 AW637857 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL166e05 BJ614026 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL195j24 BJ621029 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:8531820 EB467834 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL093l14 BJ071246 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xl253g04 DC109785 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:4203324 BG552837 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL003h13 BJ030211 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL040o19 BJ037571 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4681316 BQ885947 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL087o15 BJ075246 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL087o15 BJ092628 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL003h13 BJ045224 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL040o19 BJ052259 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4203324 BG579615 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL093l14 BJ088669 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3301393 BE491121 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3301973 BF072065 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3475142 BI347932 3' X. laevis.L Wellcome CRC pcDNAI St10 5 whole organism NF stage 10.5
XL166e05 BJ630680 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL184a12 BJ634740 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL195j24 BJ637743 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:8531820 EC277085 3' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
rxl253g04 DC075169 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk70k09ex DC024528 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk157e22ex DC029731 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5