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Summary Expression Phenotypes Gene Literature (0) GO Terms (14) Nucleotides (175) Proteins (62) Interactants (8) Wiki
XB-GENEPAGE-967575

Show:     All X. tropicalis X. laevis

Nucleotide sequences for zbtb40 - All

RefSeq mRNAs(9)
Models - Gene (31)
Models - mRNA (35)
mRNAs (11)
ESTs (32)

RefSeq mRNAs (9)

Accession Version Protein Name Length Protein Species
XM_002937036 XM_002937036.5 zinc finger and BTB domain-containing protein 40 isoform X1 5356 bp XP_002937082 X. tropicalis
XM_012967133 XM_012967133.3 zinc finger and BTB domain-containing protein 40 isoform X2 5353 bp XP_012822587 X. tropicalis
XM_012967134 XM_012967134.3 zinc finger and BTB domain-containing protein 40 isoform X3 5350 bp XP_012822588 X. tropicalis
XM_031906244 XM_031906244.1 XP_031762104.1 zinc finger and BTB domain-containing protein 40 isoform X1 5436 bp XP_031762104 X. tropicalis
XM_018226055 XM_018226055.2 zinc finger and BTB domain-containing protein 40 isoform X1 7134 bp XP_018081544 X. laevis.L
XM_018226056 XM_018226056.2 zinc finger and BTB domain-containing protein 40 isoform X1 7344 bp XP_018081545 X. laevis.L
XM_018226057 XM_018226057.2 zinc finger and BTB domain-containing protein 40 isoform X2 7113 bp XP_018081546 X. laevis.L
XM_041571443 XM_041571443.1 XP_041427377.1 zinc finger and BTB domain-containing protein 40 isoform X1 5022 bp XP_041427377 X. laevis.S
XM_041571444 XM_041571444.1 XP_041427378.1 zinc finger and BTB domain-containing protein 40 isoform X2 5016 bp XP_041427378 X. laevis.S

Models - Gene (31)

Source Version Model Species
NCBI 10.1 XBXL10_1g33472 X. laevis.S
NCBI 10.1 XBXL10_1g31300 X. laevis.L
NCBI 10.0 XBXT10g006194 X. tropicalis
ENSEMBL 10.0 zbtb40 X. tropicalis
Xenbase 9.2 gene49386 X. laevis.S
Xenbase 9.2 gene15875 X. laevis.L
JGI 9.1 Xelaev18037534m.g X. laevis.S
JGI 9.1 Xelaev18035680m.g X. laevis.L
Xenbase 9.1 gene7637 X. tropicalis
ENSEMBL 9.1 zbtb40 X. tropicalis
JGI 7.1 Xetro.G01526 X. tropicalis
JGI 6.0 XeXenL6RMv10001844m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000004737 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2570020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570043 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_257000050 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_257000051 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_257000020 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_257000012 X. tropicalis
JGI 4.1 e_gw1.257.122.1 X. tropicalis
JGI 4.1 e_gw1.257.43.1 X. tropicalis
JGI 4.1 e_gw1.257.44.1 X. tropicalis
JGI 4.1 gw1.257.122.1 X. tropicalis
JGI 4.1 gw1.257.43.1 X. tropicalis
JGI 4.1 gw1.257.44.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2570038 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570122 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2570012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2570050 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2570051 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA59199 X. laevis.L
NCBI 10.1 XBmRNA63166 X. laevis.S
ENSEMBL 10.0 ENSXETT00000073468 X. tropicalis
ENSEMBL 10.0 ENSXETT00000063792 X. tropicalis
NCBI 10.0 mRNA030584 X. tropicalis
Xenbase 9.2 rna46383 X. laevis.L
Xenbase 9.2 rna95335 X. laevis.S
ENSEMBL 9.1 ENSXETT00000010270 X. tropicalis
ENSEMBL 9.1 ENSXETT00000063792 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073468 X. tropicalis
Xenbase 9.1 rna24594 X. tropicalis
JGI 9.1 Xelaev18035680m X. laevis.L
JGI 9.1 Xelaev18037534m X. laevis.S
JGI 7.1 Xetro.G01526.2 X. tropicalis
JGI 7.1 Xetro.G01526.1 X. tropicalis
JGI 6.0 XeXenL6RMv10001844m X. laevis.L
JGI 4.1 gw1.257.122.1 X. tropicalis
JGI 4.1 gw1.257.43.1 X. tropicalis
JGI 4.1 gw1.257.44.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_257000012 X. tropicalis
JGI 4.1 e_gw1.257.43.1 X. tropicalis
JGI 4.1 e_gw1.257.44.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000010270 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2570012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2570050 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2570051 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2570020 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2570038 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2570122 X. tropicalis
JGI 4.1 e_gw1.257.122.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_257000050 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_257000051 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_257000020 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
IMAGE:7570240 BC167692 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
NM_001015916 X. tropicalis
XM_002937036 X. tropicalis
XM_012967133 X. tropicalis
XM_012967134 X. tropicalis
XM_031906244 X. tropicalis
XM_018226055 X. laevis.L
XM_018226056 X. laevis.L
XM_018226057 X. laevis.L
XM_041571443 X. laevis.S
XM_041571444 X. laevis.S

ESTs (32)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas099n12 AL961215 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7688550 CX911577 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7572872 CX436326 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570240 CX454826 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544213 CX460068 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544148 CX460275 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8853407 EL814856 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TGas077d15 AL774174 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas082f12 AL776678 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7740014 DN029948 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7638960 CX384681 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7612411 CX404794 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7659305 CX838717 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659305 CX838716 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas077d15 AL955346 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7688550 CX911576 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7544148 CX460274 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7740014 DN029947 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
TGas082f12 BX750834 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7572872 CX436325 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7638960 CX384680 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7570240 CX454825 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7599682 DR892323 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7544213 CX460067 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XL406g09ex BP693052 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl311l12 DC126542 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL177i10 BJ616606 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL475k03ex BP694804 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:5541981 BQ735983 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8825412 EG565688 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL406g09ex BP727303 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL177i10 BJ633159 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5