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Summary Expression Phenotypes Gene Literature (2) GO Terms (3) Nucleotides (236) Proteins (96) Interactants (516) Wiki
XB-GENEPAGE-971500

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for atxn3 - All

Models - Gene (36)
Models - mRNA (54)
mRNAs (23)
ESTs (55)

Models - Gene (36)

Source Version Model Species
NCBI 10.0 XBXT10g002815 X. tropicalis
NCBI 10.1 XBXL10_1g35779 X. laevis.L
NCBI 10.1 XBXL10_1g37366 X. laevis.S
ENSEMBL 10.0 atxn3 X. tropicalis
Xenbase 9.1 gene1498 X. tropicalis
Xenbase 9.2 gene4209 X. laevis.L
Xenbase 9.2 gene15564 X. laevis.S
ENSEMBL 9.1 atxn3 X. tropicalis
JGI 8.0 Xetrov14034541m.g X. tropicalis
JGI 7.1 Xetro.H01242 X. tropicalis
JGI 7.2 Xelaev16050576m.g X. laevis.L
JGI 6.0 XeXenL6RMv10011059m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000010288 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_490015 X. tropicalis
JGI 4.1 e_gw1.49.175.1 X. tropicalis
JGI 4.1 e_gw1.49.221.1 X. tropicalis
JGI 4.1 e_gw1.49.80.1 X. tropicalis
JGI 4.1 gw1.49.175.1 X. tropicalis
JGI 4.1 gw1.49.221.1 X. tropicalis
JGI 4.1 gw1.49.80.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_490033 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490080 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490175 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490221 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_490071 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_490072 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_490073 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_490021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_490022 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_49000009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_49000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_49000072 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_49000073 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_49000074 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_49000022 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_49000023 X. tropicalis

Models - mRNA (54)

Source Version Model Species
NCBI 10.0 mRNA014267 X. tropicalis
NCBI 10.1 XBmRNA67584 X. laevis.L
NCBI 10.1 XBmRNA70529 X. laevis.S
ENSEMBL 10.0 ENSXETT00000062806 X. tropicalis
ENSEMBL 10.0 ENSXETT00000022669 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067680 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081567 X. tropicalis
Xenbase 9.1 rna4863 X. tropicalis
Xenbase 9.2 rna12247 X. laevis.L
Xenbase 9.2 rna45449 X. laevis.S
ENSEMBL 9.1 ENSXETT00000062806 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085703 X. tropicalis
ENSEMBL 9.1 ENSXETT00000022669 X. tropicalis
ENSEMBL 9.1 ENSXETT00000063042 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081567 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067680 X. tropicalis
JGI 8.0 Xetrov14034541m X. tropicalis
JGI 7.1 Xetro.H01242.2 X. tropicalis
JGI 7.1 Xetro.H01242.10 X. tropicalis
JGI 7.1 Xetro.H01242.3 X. tropicalis
JGI 7.1 Xetro.H01242.4 X. tropicalis
JGI 7.1 Xetro.H01242.5 X. tropicalis
JGI 7.1 Xetro.H01242.11 X. tropicalis
JGI 7.1 Xetro.H01242.6 X. tropicalis
JGI 7.1 Xetro.H01242.9 X. tropicalis
JGI 7.1 Xetro.H01242.7 X. tropicalis
JGI 7.1 Xetro.H01242.1 X. tropicalis
JGI 7.1 Xetro.H01242.8 X. tropicalis
JGI 7.2 Xelaev16050576m X. laevis.L
JGI 6.0 XeXenL6RMv10011059m X. laevis.L
JGI 4.1 estExt_fgenesh1_kg.C_490015 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022669 X. tropicalis
JGI 4.1 e_gw1.49.175.1 X. tropicalis
JGI 4.1 e_gw1.49.221.1 X. tropicalis
JGI 4.1 e_gw1.49.80.1 X. tropicalis
JGI 4.1 gw1.49.175.1 X. tropicalis
JGI 4.1 gw1.49.221.1 X. tropicalis
JGI 4.1 gw1.49.80.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_490033 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490080 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490175 X. tropicalis
JGI 4.1 estExt_Genewise1.C_490221 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_490071 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_490072 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_490073 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_490021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_490022 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_49000009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_49000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_49000072 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_49000073 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_49000074 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_49000022 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_49000023 X. tropicalis

mRNAs (23)

Clone Accession Species Library Anatomy Stage
NM_001016389 X. tropicalis
TEgg021h08 CR761189 X. tropicalis
IMAGE:6990380 BC090121 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7548197 BC157299 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539441 BC158945 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XM_012968405 X. tropicalis
XM_018096253 X. tropicalis
XM_012968404 X. tropicalis
XM_012968403 X. tropicalis
XM_012968402 X. tropicalis
XM_012968401 X. tropicalis
XM_012968400 X. tropicalis
XM_012968399 X. tropicalis
IMAGE:5079677 BC073106 X. laevis.L
NM_001092190 X. laevis.L
XM_018232425 X. laevis.S
XM_018232423 X. laevis.S
XM_018232421 X. laevis.S
XM_018228887 X. laevis.L
XM_018228886 X. laevis.L
XM_041573017 X. laevis.L
XM_041573016 X. laevis.L
XM_041574999 X. laevis.S

ESTs (55)

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA059j08 CR435662 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
CAAO12418 CX963324 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8907352 EL801082 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8853463 EL814894 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9013739 EL859850 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
THdA051f19 CR586645 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7740637 DN031012 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7539441 CX452205 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548197 CX490226 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5383365 BQ395663 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6990380 CF217737 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TNeu052b23 AL673207 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA049b19 BX730608 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xthr42F17 CN115313 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA050l09 CR421788 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
CAAO12418 CX963323 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8907352 EL801083 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8853463 EL814895 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9013739 EL859851 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTbA059j08 CR435663 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA051f19 CR586646 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7629355 CX368660 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7539441 CX452204 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548197 CX490225 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7740637 DN031011 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:5383365 BQ395662 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TNeu052b23 BX689131 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xthr42F17 CN115312 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGp998D238304 BX846134 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL488m03ex BP699800 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL490c06ex BP700567 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:6635955 BU910182 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL005h07 BJ030888 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL005l02 BJ030971 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL211h08 BJ625399 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL212m20 BJ625831 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL213l09 BJ626104 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL213n02 BJ626134 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3743376 BE679749 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3745728 BE680502 5' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3400698 BG037441 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:3402598 BG363985 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
PBX0065D02 AW638029 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL211h08 BJ641846 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL212m20 BJ642238 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL213l09 BJ642494 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL490c06ex BP733315 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL488m03ex BP732668 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL005h07 BJ045840 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL005l02 BJ045919 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3743202 BE678368 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3743376 BE678865 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3402598 BG020348 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:4084601 BI446913 3' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3745728 BE678087 3' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)