Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (3) Nucleotides (202) Proteins (67) Interactants (119) Wiki
XB-GENEPAGE-976136

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for patz1 - All

Models - Gene (28)
Models - mRNA (35)
mRNAs (13)
ESTs (72)

Models - Gene (28)

Source Version Model Species
NCBI 10.0 XBXT10g012355 X. tropicalis
NCBI 10.1 XBXL10_1g5243 X. laevis.S
NCBI 10.1 XBXL10_1g2644 X. laevis.L
ENSEMBL 10.0 patz1 X. tropicalis
JGI 9.1 Xelaev18010478m.g X. laevis.S
JGI 9.1 Xelaev18007578m.g X. laevis.L
Xenbase 9.1 gene5500 X. tropicalis
Xenbase 9.2 gene2280 X. laevis.S
Xenbase 9.2 gene2354 X. laevis.L
ENSEMBL 9.1 patz1 X. tropicalis
JGI 8.0 Xetrov14001685m.g X. tropicalis
JGI 7.1 Xetro.A00889 X. tropicalis
JGI 6.0 XeXenL6RMv10007029m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000004190 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_120060 X. tropicalis
JGI 4.1 gw1.12.149.1 X. tropicalis
JGI 4.1 gw1.12.365.1 X. tropicalis
JGI 4.1 e_gw1.12.149.1 X. tropicalis
JGI 4.1 e_gw1.12.365.1 X. tropicalis
JGI 4.1 e_gw1.12.88.1 X. tropicalis
JGI 4.1 gw1.12.88.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_120109 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120087 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120147 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120361 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120175 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000178 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_12000062 X. tropicalis

Models - mRNA (35)

Source Version Model Species
NCBI 10.0 mRNA061198 X. tropicalis
NCBI 10.1 XBmRNA4616 X. laevis.L
NCBI 10.1 XBmRNA9726 X. laevis.S
ENSEMBL 10.0 ENSXETT00000106931 X. tropicalis
ENSEMBL 10.0 ENSXETT00000009079 X. tropicalis
ENSEMBL 10.0 ENSXETT00000088914 X. tropicalis
JGI 9.1 Xelaev18007578m X. laevis.L
JGI 9.1 Xelaev18010478m X. laevis.S
Xenbase 9.1 rna17832 X. tropicalis
Xenbase 9.2 rna6852 X. laevis.L
Xenbase 9.2 rna6626 X. laevis.S
ENSEMBL 9.1 ENSXETT00000088914 X. tropicalis
ENSEMBL 9.1 ENSXETT00000009079 X. tropicalis
JGI 8.0 Xetrov14001685m X. tropicalis
JGI 7.1 Xetro.A00889.2 X. tropicalis
JGI 7.1 Xetro.A00889.3 X. tropicalis
JGI 7.1 Xetro.A00889.4 X. tropicalis
JGI 7.1 Xetro.A00889.5 X. tropicalis
JGI 7.1 Xetro.A00889.1 X. tropicalis
JGI 6.0 XeXenL6RMv10007029m X. laevis.S
JGI 4.1 estExt_fgenesh1_pm.C_120060 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009079 X. tropicalis
JGI 4.1 e_gw1.12.149.1 X. tropicalis
JGI 4.1 e_gw1.12.365.1 X. tropicalis
JGI 4.1 e_gw1.12.88.1 X. tropicalis
JGI 4.1 gw1.12.149.1 X. tropicalis
JGI 4.1 gw1.12.365.1 X. tropicalis
JGI 4.1 gw1.12.88.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_120109 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120087 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120147 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120361 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120175 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000178 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_12000062 X. tropicalis

mRNAs (13)

Clone Accession Species Library Anatomy Stage
XM_002931897 X. tropicalis
XM_002931896 X. tropicalis
XM_004910597 X. tropicalis
XM_004910596 X. tropicalis
IMAGE:6639240 BC092304 X. laevis.S
XM_018261631 X. laevis.L
XM_018261627 X. laevis.L
XM_018261622 X. laevis.L
XM_018261620 X. laevis.L
XM_018244065 X. laevis.S
XM_018244064 X. laevis.S
XM_018244063 X. laevis.S
XM_041580279 X. laevis.S

ESTs (72)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu069e24 BX683090 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8885514 EL842384 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8922832 EL675424 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8927533 EL674945 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8934733 EL636148 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
xtbs04C07 CN073725 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs03D01 CN073492 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs01C13 CN072255 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st30h08 DC172099 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT20 CX358426 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO8511 CX956086 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7562543 CX466581 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559037 CX498640 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7736395 DN023030 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7735296 DN021259 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7734923 DN020267 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7692054 CX917982 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7663699 CX847416 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7662203 CX843811 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659645 CX839451 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653690 CX822322 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7515543 CX746287 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7519576 CX479507 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA013b23 CR563524 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA007f24 CR561098 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA076n22 CR441538 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA052f21 CR434429 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr16E09 CN099352 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas143g22 AL957890 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas036g06 AL651556 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA012e15 BX703836 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu136k07 AL796472 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu069e24 AL779321 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu034p15 AL657072 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu029a12 AL650476 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7028497 CF781313 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:8934733 EL636147 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
xtbs03D01 CN073491 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs01C13 CN072254 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst33h08 DC142631 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst32h08 DC142368 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO8511 CX956085 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7692054 CX917981 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7662203 CX843810 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653690 CX822321 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7736395 DN023029 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7735296 DN021258 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7734923 DN020266 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7659645 CX839450 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7515543 CX746286 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7559037 CX498639 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519576 CX479506 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA034i01 CR589107 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA013b23 CR563525 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA007f24 CR561099 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA076n22 CR441539 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA052f21 CR434430 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr16E09 CN099351 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas143g22 BX757335 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA012e15 BX703837 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xl251e08 DC109140 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl294d24 DC121469 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk143h03ex DC049616 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL061h09 BJ059071 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL061g09 BJ059050 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6863211 CA986728 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
rxl294d24 DC086673 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl251e08 DC074569 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk143h03ex DC016321 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL061g09 BJ077567 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL031o10 BJ051468 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3749017 BG021314 3' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5