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Summary Expression Phenotypes Gene Literature (1) GO Terms (43) Nucleotides (152) Proteins (44) Interactants (188) Wiki
XB-GENEPAGE-979584

Show:     All X. tropicalis X. laevis

Nucleotide sequences for tulp3 - All

RefSeq mRNAs(3)
Models - Gene (25)
Models - mRNA (34)
mRNAs (5)
ESTs (60)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001123481 NM_001123481.1 tubby-related protein 3 3076 bp NP_001116953 X. tropicalis
NM_001093145 NM_001093145.1 TUB like protein 3 L homeolog 2559 bp NP_001086614 X. laevis.L
XM_041585115 XM_041585115.1 XP_041441049.1 TUB like protein 3 L homeolog isoform X1 2435 bp XP_041441049 X. laevis.L

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g11858 X. laevis.L
NCBI 10.0 XBXT10g007808 X. tropicalis
ENSEMBL 10.0 tulp3 X. tropicalis
Xenbase 9.2 gene14800 X. laevis.L
JGI 9.1 Xelaev18016734m.g X. laevis.L
Xenbase 9.1 gene2440 X. tropicalis
ENSEMBL 9.1 tulp3 X. tropicalis
JGI 8.0 Xetrov14016097m.g X. tropicalis
JGI 7.2 Xelaev16062117m.g X. laevis.L
JGI 7.1 Xetro.C00920 X. tropicalis
JGI 6.0 XeXenL6RMv10046398m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000001314 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_766000010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_7660010 X. tropicalis
JGI 4.1 e_gw1.766.50.1 X. tropicalis
JGI 4.1 e_gw1.766.60.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_7660002 X. tropicalis
JGI 4.1 gw1.766.1.1 X. tropicalis
JGI 4.1 gw1.766.50.1 X. tropicalis
JGI 4.1 gw1.766.60.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_7660011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7660001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7660050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7660060 X. tropicalis
JGI 4.1 e_gw1.766.1.1 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA22142 X. laevis.L
ENSEMBL 10.0 ENSXETT00000082293 X. tropicalis
ENSEMBL 10.0 ENSXETT00000099865 X. tropicalis
ENSEMBL 10.0 ENSXETT00000074779 X. tropicalis
NCBI 10.0 mRNA038687 X. tropicalis
ENSEMBL 10.0 ENSXETT00000124500 X. tropicalis
ENSEMBL 10.0 ENSXETT00000002808 X. tropicalis
ENSEMBL 10.0 ENSXETT00000047604 X. tropicalis
Xenbase 9.2 rna43178 X. laevis.L
ENSEMBL 9.1 ENSXETT00000082293 X. tropicalis
Xenbase 9.1 rna8104 X. tropicalis
JGI 9.1 Xelaev18016734m X. laevis.L
ENSEMBL 9.1 ENSXETT00000002808 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074779 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099865 X. tropicalis
ENSEMBL 9.1 ENSXETT00000047604 X. tropicalis
JGI 8.0 Xetrov14016097m X. tropicalis
JGI 7.2 Xelaev16062117m X. laevis.L
JGI 7.1 Xetro.C00920.1 X. tropicalis
JGI 6.0 XeXenL6RMv10046398m X. laevis.L
JGI 4.1 estExt_FilteredModels1.C_7660011 X. tropicalis
JGI 4.1 e_gw1.766.50.1 X. tropicalis
JGI 4.1 e_gw1.766.60.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000002808 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_7660010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_7660002 X. tropicalis
JGI 4.1 e_gw1.766.1.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7660001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7660050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7660060 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_766000010 X. tropicalis
JGI 4.1 gw1.766.1.1 X. tropicalis
JGI 4.1 gw1.766.50.1 X. tropicalis
JGI 4.1 gw1.766.60.1 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7652783 BC160638 X. tropicalis NIH_XGC_tropBrn3 brain frog
NM_001123481 X. tropicalis
IMAGE:3402362 BC077180 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001093145 X. laevis.L
XM_041585115 X. laevis.L

ESTs (60)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu052m13 AL673182 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas018p07 AL629329 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7652783 CX820548 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653732 CX822276 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas082d07 AL777083 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7658486 CX837623 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8951560 EL654512 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7687077 CX908491 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692706 CX919260 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7854081 DT395101 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
CAAO5145 CX936844 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO8493 CX956054 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7706966 CX959260 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7757074 DR875008 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7745810 DN040532 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8954942 EL661041 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
st12j20 DC166367 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st17k01 DC167878 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st25f24 DC170339 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st27a15 DC170811 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st28a15 DC171096 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st80j03 DC186638 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st82l19 DC187160 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:4461411 BG816395 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7536453 CX477870 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519943 CX480034 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas005e09 AL595297 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7520533 CX481070 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560082 CX515986 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8957727 EL660054 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7711801 CX968954 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7710769 CX966732 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7710310 CX966521 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7745810 DN040531 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:4461411 BG812495 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TGas082d07 BX750805 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
rst17j01 DC137776 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst18k01 DC138066 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst27a15 DC140651 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst28a15 DC140936 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7536453 CX477869 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520533 CX481069 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7652783 CX820547 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7658486 CX837622 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7686727 CX907681 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO5145 CX936843 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7710310 CX966520 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7710769 CX966731 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7711801 CX968953 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7757074 DR875007 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
PBX0075D10 AW638855 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3402362 BG037750 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xlk138m09ex DC048080 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
PBX0081C07 AW639231 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL503p15ex BP702125 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998K038303 BX851002 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL075n16 BJ062390 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL503p15ex BP735070 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3402362 BG019728 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
rxlk138m09ex DC014842 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5