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Summary Expression Phenotypes Gene Literature (13) GO Terms (44) Nucleotides (120) Proteins (64) Interactants (109) Wiki
XB-GENEPAGE-986140

Show:     All X. tropicalis X. laevis

Nucleotide sequences for nectin1 - All

RefSeq mRNAs(14)
Models - Gene (38)
Models - mRNA (41)
mRNAs (16)
ESTs (3)

RefSeq mRNAs (14)

Accession Version Protein Name Length Protein Species
XM_002935009 XM_002935009.5 nectin-1 isoform X2 8406 bp XP_002935055 X. tropicalis
XM_018096072 XM_018096072.2 nectin-1 isoform X1 4068 bp XP_017951561 X. tropicalis
XM_018096073 XM_018096073.2 nectin-1 isoform X3 2635 bp XP_017951562 X. tropicalis
XM_018224576 XM_018224576.2 nectin-1 isoform X2 4839 bp XP_018080065 X. laevis.L
XM_041569228 XM_041569228.1 XP_041425162.1 nectin-1 isoform X1 2610 bp XP_041425162 X. laevis.L
XM_041569229 XM_041569229.1 XP_041425163.1 nectin-1 isoform X3 2424 bp XP_041425163 X. laevis.L
XM_041569230 XM_041569230.1 XP_041425164.1 nectin-1 isoform X4 2403 bp XP_041425164 X. laevis.L
XM_041569231 XM_041569231.1 XP_041425165.1 nectin-1 isoform X5 1903 bp XP_041425165 X. laevis.L
XM_018227783 XM_018227783.2 nectin-1 isoform X2 7959 bp XP_018083272 X. laevis.S
XM_018227783 nectin-1 isoform X2 7959 bp XP_018083272 X. laevis.S
XM_041571330 XM_041571330.1 XP_041427264.1 nectin-1 isoform X1 2735 bp XP_041427264 X. laevis.S
XM_041571331 XM_041571331.1 XP_041427265.1 nectin-1 isoform X3 2544 bp XP_041427265 X. laevis.S
XM_041571332 XM_041571332.1 XP_041427266.1 nectin-1 isoform X4 2621 bp XP_041427266 X. laevis.S
XM_041571333 XM_041571333.1 XP_041427267.1 nectin-1 isoform X5 2430 bp XP_041427267 X. laevis.S

Models - Gene (38)

Source Version Model Species
NCBI 10.1 XBXL10_1g31046 X. laevis.L
NCBI 10.0 XBXT10g011330 X. tropicalis
NCBI 10.1 XBXL10_1g33264 X. laevis.S
ENSEMBL 10.0 nectin1 X. tropicalis
Xenbase 9.2 gene11376 X. laevis.L
Xenbase 9.1 gene33837 X. tropicalis
ENSEMBL 9.1 nectin1 X. tropicalis
JGI 8.0 Xetrov14030764m.g X. tropicalis
JGI 7.2 Xelaev16038844m.g X. laevis.L
JGI 7.1 Xetro.G01226 X. tropicalis
JGI 6.0 XeXenL6RMv10007216m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000009243 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1240005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1240021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1240049 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1240110 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1240134 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1240010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1240039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1240040 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1240041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1240011 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_124000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_124000040 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_124000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_124000042 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_124000011 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1240023 X. tropicalis
JGI 4.1 e_gw1.124.5.1 X. tropicalis
JGI 4.1 e_gw1.124.49.1 X. tropicalis
JGI 4.1 e_gw1.124.21.1 X. tropicalis
JGI 4.1 e_gw1.124.110.1 X. tropicalis
JGI 4.1 gw1.124.5.1 X. tropicalis
JGI 4.1 gw1.124.49.1 X. tropicalis
JGI 4.1 gw1.124.21.1 X. tropicalis
JGI 4.1 gw1.124.134.1 X. tropicalis
JGI 4.1 gw1.124.110.1 X. tropicalis
JGI 4.1 e_gw1.124.134.1 X. tropicalis

mRNAs based on gene models(41)

Source Version Model Species
NCBI 10.1 XBmRNA62747 X. laevis.S
NCBI 10.1 XBmRNA58685 X. laevis.L
ENSEMBL 10.0 ENSXETT00000020305 X. tropicalis
NCBI 10.0 mRNA056241 X. tropicalis
ENSEMBL 10.0 ENSXETT00000124400 X. tropicalis
Xenbase 9.2 rna33063 X. laevis.L
Xenbase 9.1 rna63770 X. tropicalis
ENSEMBL 9.1 ENSXETT00000020305 X. tropicalis
JGI 8.0 Xetrov14030764m X. tropicalis
JGI 7.2 Xelaev16038844m X. laevis.L
JGI 7.1 Xetro.G01226.1 X. tropicalis
JGI 6.0 XeXenL6RMv10007216m X. laevis.L
JGI 4.1 estExt_Genewise1.C_1240110 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1240049 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1240021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1240005 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1240023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1240011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1240041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1240040 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1240039 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1240010 X. tropicalis
JGI 4.1 e_gw1.124.49.1 X. tropicalis
JGI 4.1 e_gw1.124.21.1 X. tropicalis
JGI 4.1 e_gw1.124.134.1 X. tropicalis
JGI 4.1 e_gw1.124.110.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000020305 X. tropicalis
ENSEMBL 4.1 ENSXETT00000020301 X. tropicalis
ENSEMBL 4.1 ENSXETT00000020300 X. tropicalis
JGI 4.1 e_gw1.124.5.1 X. tropicalis
JGI 4.1 gw1.124.5.1 X. tropicalis
JGI 4.1 gw1.124.49.1 X. tropicalis
JGI 4.1 gw1.124.21.1 X. tropicalis
JGI 4.1 gw1.124.134.1 X. tropicalis
JGI 4.1 gw1.124.110.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_124000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_124000042 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_124000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_124000040 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_124000011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1240134 X. tropicalis

mRNAs from cDNA libraries (16)

Clone Accession Species Library Anatomy Stage
XM_002935009 X. tropicalis
XM_018096072 X. tropicalis
XM_018096073 X. tropicalis
IMAGE:3399968 BC083038 X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
NM_001094680 X. laevis.L
XM_018224576 X. laevis.L
XM_041569228 X. laevis.L
XM_041569229 X. laevis.L
XM_041569230 X. laevis.L
XM_041569231 X. laevis.L
XM_018227783 X. laevis.S
XM_018227783 X. laevis.S
XM_041571330 X. laevis.S
XM_041571331 X. laevis.S
XM_041571332 X. laevis.S
XM_041571333 X. laevis.S

ESTs (3)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7655697 CX826187 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
XL161n04 BJ613041 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3399968 BG161930 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25