Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (4) GO Terms (8) Nucleotides (156) Proteins (74) Interactants (59) Wiki
XB-GENEPAGE-989093

Show:     All X. tropicalis X. laevis

Nucleotide sequences for smoc1 - All

RefSeq mRNAs(21)
Models - Gene (21)
Models - mRNA (31)
mRNAs (23)
ESTs (27)

RefSeq mRNAs (21)

Accession Version Protein Name Length Protein Species
NM_001127107 NM_001127107.1 SPARC-related modular calcium-binding protein 1 precursor 3069 bp NP_001120579 X. tropicalis
XM_012968039 XM_012968039.2 SPARC-related modular calcium-binding protein 1 isoform X1 3318 bp XP_012823493 X. tropicalis
XM_012968040 XM_012968040.2 SPARC-related modular calcium-binding protein 1 isoform X2 3315 bp XP_012823494 X. tropicalis
XM_012968041 XM_012968041.2 SPARC-related modular calcium-binding protein 1 isoform X3 3284 bp XP_012823495 X. tropicalis
XM_012968042 XM_012968042.2 SPARC-related modular calcium-binding protein 1 isoform X4 3233 bp XP_012823496 X. tropicalis
XM_012968043 XM_012968043.2 SPARC-related modular calcium-binding protein 1 isoform X5 3227 bp XP_012823497 X. tropicalis
XM_012968044 XM_012968044.2 SPARC-related modular calcium-binding protein 1 isoform X6 3200 bp XP_012823498 X. tropicalis
XM_012968045 XM_012968045.2 SPARC-related modular calcium-binding protein 1 isoform X7 3143 bp XP_012823499 X. tropicalis
NM_001143900 NM_001143900.1 SPARC related modular calcium binding 1 L homeolog precursor 1476 bp NP_001137372 X. laevis.L
XM_018228556 XM_018228556.2 SPARC related modular calcium binding 1 L homeolog isoform X2 3721 bp XP_018084045 X. laevis.L
XM_018228557 XM_018228557.2 SPARC related modular calcium binding 1 L homeolog isoform X3 3688 bp XP_018084046 X. laevis.L
XM_018228558 XM_018228558.2 SPARC related modular calcium binding 1 L homeolog isoform X4 3637 bp XP_018084047 X. laevis.L
XM_018228559 XM_018228559.2 SPARC related modular calcium binding 1 L homeolog isoform X5 3604 bp XP_018084048 X. laevis.L
XM_018228560 XM_018228560.2 SPARC related modular calcium binding 1 L homeolog isoform X6 3547 bp XP_018084049 X. laevis.L
XM_041571872 XM_041571872.1 XP_041427806.1 SPARC related modular calcium binding 1 L homeolog isoform X1 1691 bp XP_041427806 X. laevis.L
XM_018232228 XM_018232228.2 SPARC-related modular calcium-binding protein 1 isoform X5 1773 bp XP_018087717 X. laevis.S
XM_041574720 XM_041574720.1 XP_041430654.1 SPARC-related modular calcium-binding protein 1 isoform X1 1864 bp XP_041430654 X. laevis.S
XM_041574721 XM_041574721.1 XP_041430655.1 SPARC-related modular calcium-binding protein 1 isoform X2 1830 bp XP_041430655 X. laevis.S
XM_041574722 XM_041574722.1 XP_041430656.1 SPARC-related modular calcium-binding protein 1 isoform X3 1817 bp XP_041430656 X. laevis.S
XM_041574723 XM_041574723.1 XP_041430657.1 SPARC-related modular calcium-binding protein 1 isoform X4 1780 bp XP_041430657 X. laevis.S
XM_041574724 XM_041574724.1 XP_041430658.1 SPARC-related modular calcium-binding protein 1 isoform X6 1746 bp XP_041430658 X. laevis.S

Models - Gene (21)

Source Version Model Species
NCBI 10.1 XBXL10_1g36091 X. laevis.L
NCBI 10.1 XBXL10_1g37153 X. laevis.S
NCBI 10.0 XBXT10g018750 X. tropicalis
ENSEMBL 10.0 smoc1 X. tropicalis
Xenbase 9.2 gene17052 X. laevis.S
Xenbase 9.2 gene13433 X. laevis.L
JGI 9.1 Xelaev18041061m.g X. laevis.S
JGI 9.1 Xelaev18039906m.g X. laevis.L
Xenbase 9.1 gene24658 X. tropicalis
ENSEMBL 9.1 smoc1 X. tropicalis
JGI 8.0 Xetrov14035256m.g X. tropicalis
JGI 7.2 Xelaev16080487m.g X. laevis.L
JGI 7.1 Xetro.H01765 X. tropicalis
JGI 6.0 XeXenL6RMv10016400m.g X. laevis.L
JGI 4.1 e_gw1.246.2.1 X. tropicalis
JGI 4.1 gw1.246.47.1 X. tropicalis
JGI 4.1 gw1.246.48.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_246000027 X. tropicalis
JGI 4.1 e_gw1.246.47.1 X. tropicalis
JGI 4.1 e_gw1.246.48.1 X. tropicalis
JGI 4.1 gw1.246.2.1 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA68291 X. laevis.L
NCBI 10.1 XBmRNA70081 X. laevis.S
NCBI 10.0 mRNA092621 X. tropicalis
ENSEMBL 10.0 ENSXETT00000074718 X. tropicalis
ENSEMBL 10.0 ENSXETT00000060352 X. tropicalis
ENSEMBL 10.0 ENSXETT00000104561 X. tropicalis
ENSEMBL 10.0 ENSXETT00000075125 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095278 X. tropicalis
Xenbase 9.2 rna39094 X. laevis.L
Xenbase 9.2 rna49817 X. laevis.S
ENSEMBL 9.1 ENSXETT00000095278 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075125 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104561 X. tropicalis
JGI 9.1 Xelaev18041061m X. laevis.S
ENSEMBL 9.1 ENSXETT00000060352 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074718 X. tropicalis
JGI 9.1 Xelaev18039906m X. laevis.L
Xenbase 9.1 rna49072 X. tropicalis
JGI 8.0 Xetrov14035256m X. tropicalis
JGI 7.2 Xelaev16080487m X. laevis.L
JGI 7.1 Xetro.H01765.1 X. tropicalis
JGI 7.1 Xetro.H01765.2 X. tropicalis
JGI 7.1 Xetro.H01765.3 X. tropicalis
JGI 6.0 XeXenL6RMv10016400m X. laevis.L
JGI 4.1 gw1.246.47.1 X. tropicalis
JGI 4.1 e_gw1.246.47.1 X. tropicalis
JGI 4.1 e_gw1.246.48.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_246000027 X. tropicalis
JGI 4.1 gw1.246.2.1 X. tropicalis
JGI 4.1 e_gw1.246.2.1 X. tropicalis
JGI 4.1 gw1.246.48.1 X. tropicalis

mRNAs from cDNA libraries (23)

Clone Accession Species Library Anatomy Stage
IMAGE:7740254 BC161563 X. tropicalis NIH_XGC_tropLiv1 liver frog
NM_001127107 X. tropicalis
XM_012968039 X. tropicalis
XM_012968040 X. tropicalis
XM_012968041 X. tropicalis
XM_012968042 X. tropicalis
XM_012968043 X. tropicalis
XM_012968044 X. tropicalis
XM_012968045 X. tropicalis
EU287947 X. laevis.L
NM_001143900 X. laevis.L
XM_018228556 X. laevis.L
XM_018228557 X. laevis.L
XM_018228558 X. laevis.L
XM_018228559 X. laevis.L
XM_018228560 X. laevis.L
XM_041571872 X. laevis.L
XM_018232228 X. laevis.S
XM_041574720 X. laevis.S
XM_041574721 X. laevis.S
XM_041574722 X. laevis.S
XM_041574723 X. laevis.S
XM_041574724 X. laevis.S

ESTs (27)

Clone Accession 5'/3' Species Library Anatomy Stage
XZT4080 CX399856 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8866117 EL703614 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
TNeu096d22 AL786892 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8887678 EL845547 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8859753 EL844588 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7799065 DN060126 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7740254 DN030643 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7716801 CX977718 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8866117 EL703613 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
XZT4080 CX399855 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7716801 CX977717 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7740254 DN030642 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8859753 EL844589 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8887678 EL845548 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XL103i21 BJ057871 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL047h18 BJ040736 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL069n24 BJ063015 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4959729 BM192493 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL077a12 BJ063685 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGp998K198296 BX849426 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGp998I188296 BX845857 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
XL077a12 BJ081824 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3399690 BE505678 3' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
XL047h18 BJ055113 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL069n24 BJ080937 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL103i21 BJ075754 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4959729 BM192819 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32