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Summary Expression Phenotypes Gene Literature (2) GO Terms (1) Nucleotides (210) Proteins (85) Interactants (262) Wiki
XB-GENEPAGE-993137

Show:     All X. tropicalis X. laevis

Nucleotide sequences for r3hdm2 - All

RefSeq mRNAs(22)
Models - Gene (28)
Models - mRNA (41)
mRNAs (25)
ESTs (77)

RefSeq mRNAs (22)

Accession Version Protein Name Length Protein Species
NM_001130339 NM_001130339.1 R3H domain-containing protein 2 3630 bp NP_001123811 X. tropicalis
XM_012956546 XM_012956546.3 R3H domain-containing protein 2 isoform X3 6245 bp XP_012812000 X. tropicalis
XM_018091108 XM_018091108.2 R3H domain-containing protein 2 isoform X1 6300 bp XP_017946597 X. tropicalis
XM_031895735 XM_031895735.1 XP_031751595.1 R3H domain-containing protein 2 isoform X1 6094 bp XP_031751595 X. tropicalis
XM_031895736 XM_031895736.1 XP_031751596.1 R3H domain-containing protein 2 isoform X2 6259 bp XP_031751596 X. tropicalis
XM_031895737 XM_031895737.1 XP_031751597.1 R3H domain-containing protein 2 isoform X4 6206 bp XP_031751597 X. tropicalis
NM_001095964 NM_001095964.1 R3H domain containing 2 L homeolog 5660 bp NP_001089433 X. laevis.L
XM_041581090 XM_041581090.1 XP_041437024.1 R3H domain containing 2 L homeolog isoform X1 5751 bp XP_041437024 X. laevis.L
XM_041581091 XM_041581091.1 XP_041437025.1 R3H domain containing 2 L homeolog isoform X1 6168 bp XP_041437025 X. laevis.L
XM_041581092 XM_041581092.1 XP_041437026.1 R3H domain containing 2 L homeolog isoform X2 5708 bp XP_041437026 X. laevis.L
XM_041581093 XM_041581093.1 XP_041437027.1 R3H domain containing 2 L homeolog isoform X3 5696 bp XP_041437027 X. laevis.L
XM_041581094 XM_041581094.1 XP_041437028.1 R3H domain containing 2 L homeolog isoform X4 5658 bp XP_041437028 X. laevis.L
XM_041581095 XM_041581095.1 XP_041437029.1 R3H domain containing 2 L homeolog isoform X5 5603 bp XP_041437029 X. laevis.L
XM_041581096 XM_041581096.1 XP_041437030.1 R3H domain containing 2 L homeolog isoform X6 5082 bp XP_041437030 X. laevis.L
XM_041584409 XM_041584409.1 XP_041440343.1 R3H domain-containing protein 2-like isoform X1 5812 bp XP_041440343 X. laevis.S
XM_041584410 XM_041584410.1 XP_041440344.1 R3H domain-containing protein 2-like isoform X1 5642 bp XP_041440344 X. laevis.S
XM_041584411 XM_041584411.1 XP_041440345.1 R3H domain-containing protein 2-like isoform X2 5809 bp XP_041440345 X. laevis.S
XM_041584412 XM_041584412.1 XP_041440346.1 R3H domain-containing protein 2-like isoform X3 5769 bp XP_041440346 X. laevis.S
XM_041584413 XM_041584413.1 XP_041440347.1 R3H domain-containing protein 2-like isoform X4 5757 bp XP_041440347 X. laevis.S
XM_041584414 XM_041584414.1 XP_041440348.1 R3H domain-containing protein 2-like isoform X5 5754 bp XP_041440348 X. laevis.S
XM_041584415 XM_041584415.1 XP_041440349.1 R3H domain-containing protein 2-like isoform X6 5718 bp XP_041440349 X. laevis.S
XM_041584416 XM_041584416.1 XP_041440350.1 R3H domain-containing protein 2-like isoform X7 5663 bp XP_041440350 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g8116 X. laevis.L
NCBI 10.1 XBXL10_1g10757 X. laevis.S
NCBI 10.0 XBXT10g011949 X. tropicalis
ENSEMBL 10.0 r3hdm2 X. tropicalis
Xenbase 9.2 gene41596 X. laevis.L
JGI 9.1 Xelaev18013431m.g X. laevis.L
JGI 9.1 Xelaev18015922m.g X. laevis.S
Xenbase 9.1 gene4693 X. tropicalis
ENSEMBL 9.1 r3hdm2 X. tropicalis
JGI 8.0 Xetrov14010238m.g X. tropicalis
JGI 7.2 Xelaev16069238m.g X. laevis.L
JGI 7.1 Xetro.B01384 X. tropicalis
JGI 6.0 XeXenL6RMv10023645m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000017153 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_485000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_485000011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4850003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4850011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4850023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4850022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4850006 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4850005 X. tropicalis
JGI 4.1 gw1.485.6.1 X. tropicalis
JGI 4.1 gw1.485.23.1 X. tropicalis
JGI 4.1 gw1.485.22.1 X. tropicalis
JGI 4.1 e_gw1.485.6.1 X. tropicalis
JGI 4.1 e_gw1.485.22.1 X. tropicalis
JGI 4.1 e_gw1.485.23.1 X. tropicalis

mRNAs based on gene models(41)

Source Version Model Species
NCBI 10.1 XBmRNA20236 X. laevis.S
NCBI 10.1 XBmRNA15352 X. laevis.L
NCBI 10.0 mRNA059294 X. tropicalis
ENSEMBL 10.0 ENSXETT00000068385 X. tropicalis
ENSEMBL 10.0 ENSXETT00000078054 X. tropicalis
ENSEMBL 10.0 ENSXETT00000037400 X. tropicalis
ENSEMBL 10.0 ENSXETT00000063883 X. tropicalis
Xenbase 9.2 rna84089 X. laevis.L
ENSEMBL 9.1 ENSXETT00000078054 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095808 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096592 X. tropicalis
JGI 9.1 Xelaev18013431m X. laevis.L
Xenbase 9.1 rna15300 X. tropicalis
ENSEMBL 9.1 ENSXETT00000037400 X. tropicalis
ENSEMBL 9.1 ENSXETT00000063883 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068385 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073064 X. tropicalis
JGI 9.1 Xelaev18015922m X. laevis.S
JGI 8.0 Xetrov14010238m X. tropicalis
JGI 7.2 Xelaev16069238m X. laevis.L
JGI 7.1 Xetro.B01384.2 X. tropicalis
JGI 7.1 Xetro.B01384.5 X. tropicalis
JGI 7.1 Xetro.B01384.4 X. tropicalis
JGI 7.1 Xetro.B01384.3 X. tropicalis
JGI 7.1 Xetro.B01384.1 X. tropicalis
JGI 6.0 XeXenL6RMv10023645m X. laevis.L
ENSEMBL 4.1 ENSXETT00000037400 X. tropicalis
JGI 4.1 e_gw1.485.22.1 X. tropicalis
JGI 4.1 e_gw1.485.23.1 X. tropicalis
JGI 4.1 e_gw1.485.6.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4850011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4850003 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4850005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4850006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4850022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4850023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_485000011 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_485000003 X. tropicalis
JGI 4.1 gw1.485.22.1 X. tropicalis
JGI 4.1 gw1.485.23.1 X. tropicalis
JGI 4.1 gw1.485.6.1 X. tropicalis

mRNAs from cDNA libraries (25)

Clone Accession Species Library Anatomy Stage
IMAGE:7688734 BC167616 X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu122i02 CR942707 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001130339 X. tropicalis
XM_012956546 X. tropicalis
XM_018091108 X. tropicalis
XM_031895735 X. tropicalis
XM_031895736 X. tropicalis
XM_031895737 X. tropicalis
IMAGE:6948407 BC094491 X. laevis.L
NM_001095964 X. laevis.L
XM_041581090 X. laevis.L
XM_041581091 X. laevis.L
XM_041581092 X. laevis.L
XM_041581093 X. laevis.L
XM_041581094 X. laevis.L
XM_041581095 X. laevis.L
XM_041581096 X. laevis.L
XM_041584409 X. laevis.S
XM_041584410 X. laevis.S
XM_041584411 X. laevis.S
XM_041584412 X. laevis.S
XM_041584413 X. laevis.S
XM_041584414 X. laevis.S
XM_041584415 X. laevis.S
XM_041584416 X. laevis.S

ESTs (77)

Clone Accession 5'/3' Species Library Anatomy Stage
CAAN11356 CX927135 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688734 CX912218 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu099h02 AL787005 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
st38c07 DC176183 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs10E15 CN075342 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
CAAN10893 CX926277 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7661607 CX842960 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8921592 EL836303 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7641168 CX795099 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
CAAO12598 CX963649 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7687543 CX909093 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686552 CX908146 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu122i02 AL792304 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7661607 CX842959 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
CAAN10893 CX926276 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu099h02 BX692138 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu122i02 BX699735 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
CAAO12598 CX963648 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAN11356 CX927134 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686552 CX908145 3' X. tropicalis NIH_XGC_tropTe4 testis frog
xtbs10E15 CN075341 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7641168 CX795098 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8921592 EL836304 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
xl302c13 DC123714 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl304e24 DC124337 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl309d13 DC125789 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl311c24 DC126383 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL458m23ex BP688902 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL014g03 BJ031715 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL020l07 BJ033411 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL037c11 BJ036695 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
PBX0163E04 AW646399 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6940150 CD100385 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:8532734 EB469764 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:6876596 CB201447 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:5515350 CF290544 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3301432 BE132337 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:5278742 BQ398582 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGp998G038087 BX851269 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:6325433 CA973292 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:7298901 CO384876 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:7297752 CO389133 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:5155712 CA792823 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5156462 CA793123 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL162a04 BJ613084 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL179o02 BJ617222 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL181o01 BJ617699 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182l01 BJ617876 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182n01 BJ617899 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182p03 BJ617930 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL183o02 BJ618170 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL203h24 BJ623128 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL206h07 BJ623898 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL207h07 BJ624156 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl261m07 DC112269 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl263m07 DC112881 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl266b03 DC113576 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl301c13 DC123417 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL103i02 BJ057862 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL064a20 BJ059840 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL085h14 BJ066214 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL014g03 BJ046750 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL458m23ex BP724028 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL444j07ex BP719981 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl309d13 DC090784 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL207h07 BJ640727 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL206h07 BJ640490 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182p03 BJ634463 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182n01 BJ634431 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:5278742 BQ398581 3' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:3301658 BF071866 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL103i02 BJ075736 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL085h14 BJ083536 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL064a20 BJ092101 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6876596 CB564528 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:8532734 EC277285 3' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL020l07 BJ048702 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15