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Summary Expression Phenotypes Gene Literature (2) GO Terms (13) Nucleotides (153) Proteins (80) Interactants (95) Wiki
XB-GENEPAGE-994756

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rfx1 - All

RefSeq mRNAs(18)
Models - Gene (23)
Models - mRNA (40)
mRNAs (18)
ESTs (29)

RefSeq mRNAs (18)

Accession Version Protein Name Length Protein Species
XM_031899464 XM_031899464.1 XP_031755324.1 MHC class II regulatory factor RFX1 isoform X1 4448 bp XP_031755324 X. tropicalis
XM_031899465 XM_031899465.1 XP_031755325.1 MHC class II regulatory factor RFX1 isoform X1 4164 bp XP_031755325 X. tropicalis
XM_031899466 XM_031899466.1 XP_031755326.1 MHC class II regulatory factor RFX1 isoform X2 4447 bp XP_031755326 X. tropicalis
XM_031899467 XM_031899467.1 XP_031755327.1 MHC class II regulatory factor RFX1 isoform X3 4437 bp XP_031755327 X. tropicalis
XM_031899468 XM_031899468.1 XP_031755328.1 MHC class II regulatory factor RFX1 isoform X4 4260 bp XP_031755328 X. tropicalis
XM_031899469 XM_031899469.1 XP_031755329.1 MHC class II regulatory factor RFX1 isoform X5 4221 bp XP_031755329 X. tropicalis
XM_031899470 XM_031899470.1 XP_031755330.1 MHC class II regulatory factor RFX1 isoform X6 4032 bp XP_031755330 X. tropicalis
XM_018253710 XM_018253710.2 MHC class II regulatory factor RFX1 isoform X1 4601 bp XP_018109199 X. laevis.L
XM_018253711 XM_018253711.2 MHC class II regulatory factor RFX1 isoform X2 4535 bp XP_018109200 X. laevis.L
XM_018253712 XM_018253712.2 MHC class II regulatory factor RFX1 isoform X3 4517 bp XP_018109201 X. laevis.L
XM_018253714 XM_018253714.2 MHC class II regulatory factor RFX1 isoform X5 4382 bp XP_018109203 X. laevis.L
XM_041587307 XM_041587307.1 XP_041443241.1 MHC class II regulatory factor RFX1 isoform X4 4451 bp XP_041443241 X. laevis.L
XM_018239647 XM_018239647.2 MHC class II regulatory factor RFX1 isoform X1 3834 bp XP_018095136 X. laevis.S
XM_018239648 XM_018239648.2 MHC class II regulatory factor RFX1 isoform X1 3528 bp XP_018095137 X. laevis.S
XM_018239649 XM_018239649.2 MHC class II regulatory factor RFX1 isoform X1 3462 bp XP_018095138 X. laevis.S
XM_018239650 XM_018239650.2 MHC class II regulatory factor RFX1 isoform X1 3460 bp XP_018095139 X. laevis.S
XM_018239651 XM_018239651.2 MHC class II regulatory factor RFX1 isoform X2 3737 bp XP_018095140 X. laevis.S
XM_018239652 XM_018239652.2 MHC class II regulatory factor RFX1 isoform X3 3618 bp XP_018095141 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g14273 X. laevis.L
NCBI 10.1 XBXL10_1g17208 X. laevis.S
NCBI 10.0 XBXT10g003870 X. tropicalis
ENSEMBL 10.0 rfx1 X. tropicalis
Xenbase 9.2 gene43158 X. laevis.L
Xenbase 9.2 gene18502 X. laevis.S
Xenbase 9.1 gene33528 X. tropicalis
ENSEMBL 9.1 rfx1 X. tropicalis
JGI 7.1 Xetro.K00834 X. tropicalis
JGI 6.0 XeXenL6RMv10030076m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000005567 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6490004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_649000004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6490164 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6490110 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6490109 X. tropicalis
JGI 4.1 gw1.649.164.1 X. tropicalis
JGI 4.1 gw1.649.110.1 X. tropicalis
JGI 4.1 gw1.649.109.1 X. tropicalis
JGI 4.1 e_gw1.649.164.1 X. tropicalis
JGI 4.1 e_gw1.649.110.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6490004 X. tropicalis
JGI 4.1 e_gw1.649.109.1 X. tropicalis

mRNAs based on gene models(40)

Source Version Model Species
NCBI 10.1 XBmRNA26930 X. laevis.L
NCBI 10.1 XBmRNA31902 X. laevis.S
ENSEMBL 10.0 ENSXETT00000012247 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095388 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083772 X. tropicalis
ENSEMBL 10.0 ENSXETT00000098786 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094505 X. tropicalis
NCBI 10.0 mRNA019481 X. tropicalis
Xenbase 9.2 rna54015 X. laevis.S
Xenbase 9.2 rna86424 X. laevis.L
ENSEMBL 9.1 ENSXETT00000103615 X. tropicalis
ENSEMBL 9.1 ENSXETT00000012247 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083772 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094505 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095388 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097015 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098786 X. tropicalis
Xenbase 9.1 rna63158 X. tropicalis
JGI 7.1 Xetro.K00834.2 X. tropicalis
JGI 7.1 Xetro.K00834.3 X. tropicalis
JGI 7.1 Xetro.K00834.1 X. tropicalis
JGI 6.0 XeXenL6RMv10030076m X. laevis.L
JGI 4.1 estExt_FilteredModels1.C_6490004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6490109 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6490110 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6490164 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_649000004 X. tropicalis
JGI 4.1 gw1.649.109.1 X. tropicalis
JGI 4.1 gw1.649.110.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012258 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012256 X. tropicalis
JGI 4.1 e_gw1.649.110.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012261 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012250 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012260 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012247 X. tropicalis
JGI 4.1 gw1.649.164.1 X. tropicalis
JGI 4.1 e_gw1.649.164.1 X. tropicalis
JGI 4.1 e_gw1.649.109.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6490004 X. tropicalis

mRNAs from cDNA libraries (18)

Clone Accession Species Library Anatomy Stage
XM_031899464 X. tropicalis
XM_031899465 X. tropicalis
XM_031899466 X. tropicalis
XM_031899467 X. tropicalis
XM_031899468 X. tropicalis
XM_031899469 X. tropicalis
XM_031899470 X. tropicalis
XM_018253710 X. laevis.L
XM_018253711 X. laevis.L
XM_018253712 X. laevis.L
XM_018253714 X. laevis.L
XM_041587307 X. laevis.L
XM_018239647 X. laevis.S
XM_018239648 X. laevis.S
XM_018239649 X. laevis.S
XM_018239650 X. laevis.S
XM_018239651 X. laevis.S
XM_018239652 X. laevis.S

ESTs (29)

Clone Accession 5'/3' Species Library Anatomy Stage
st9l19 DC175785 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7611908 CX404069 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7689505 CX913317 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694065 CX921154 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694668 CX922787 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11027 CX926525 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11335 CX927095 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO7627 CX941339 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7706484 CX958529 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO7627 CX941338 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7694668 CX922786 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11335 CX927094 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7706484 CX958528 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7689505 CX913316 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11027 CX926524 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694065 CX921153 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7981017 DR729859 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8541931 EB470836 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
XL085k19 BJ066285 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL174n08 BJ615881 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl312h22 DC126782 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7981585 DR726787 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8319800 DY565463 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
rxl312h22 DC091714 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7981585 DR726849 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL085k19 BJ083608 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8541931 EC276418 3' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
rxlk116n15ex DC008073 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL174n08 BJ632494 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5