Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (16) Nucleotides (107) Proteins (54) Interactants (5) Wiki
XB-GENEPAGE-995890

Show:     All X. tropicalis X. laevis

Nucleotide sequences for fgd3 - All

RefSeq mRNAs(6)
Models - Gene (26)
Models - mRNA (43)
mRNAs (7)
ESTs (12)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
XM_002941737 FYVE, RhoGEF and PH domain-containing protein 3 isoform X2 4706 bp XP_002941783 X. tropicalis
XM_004914180 XM_004914180.4 FYVE, RhoGEF and PH domain-containing protein 3 isoform X1 5176 bp XP_004914237 X. tropicalis
XM_012961791 XM_012961791.3 FYVE, RhoGEF and PH domain-containing protein 3 isoform X2 5090 bp XP_012817245 X. tropicalis
XM_018240399 XM_018240399.2 FYVE, RhoGEF and PH domain-containing protein 3 4920 bp XP_018095888 X. laevis.L
XM_041561870 XM_041561870.1 XP_041417804.1 FYVE, RhoGEF and PH domain-containing protein 3-like isoform X1 4755 bp XP_041417804 X. laevis.S
XM_041561871 XM_041561871.1 XP_041417805.1 FYVE, RhoGEF and PH domain-containing protein 3-like isoform X2 4672 bp XP_041417805 X. laevis.S

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g22438 X. laevis.S
NCBI 10.1 XBXL10_1g20160 X. laevis.L
NCBI 10.0 XBXT10g016170 X. tropicalis
ENSEMBL 10.0 bicd2 X. tropicalis
Xenbase 9.2 gene36205 X. laevis.L
Xenbase 9.2 gene6946 X. laevis.S
JGI 9.1 Xelaev18001807m.g X. laevis.L
JGI 9.1 Xelaev18002565m.g X. laevis.S
Xenbase 9.1 gene25693 X. tropicalis
ENSEMBL 9.1 fgd3 X. tropicalis
JGI 7.1 Xetro.D02554 X. tropicalis
JGI 6.0 XeXenL6RMv10019257m.g X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_8360007 X. tropicalis
JGI 4.1 e_gw1.836.59.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_836000007 X. tropicalis
JGI 4.1 e_gw1.836.58.1 X. tropicalis
JGI 4.1 e_gw1.836.94.1 X. tropicalis
JGI 4.1 e_gw1.836.96.1 X. tropicalis
JGI 4.1 gw1.836.58.1 X. tropicalis
JGI 4.1 gw1.836.59.1 X. tropicalis
JGI 4.1 gw1.836.94.1 X. tropicalis
JGI 4.1 gw1.836.96.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_8360010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8360059 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8360094 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8360096 X. tropicalis

mRNAs based on gene models(43)

Source Version Model Species
NCBI 10.1 XBmRNA37412 X. laevis.L
NCBI 10.1 XBmRNA41774 X. laevis.S
ENSEMBL 10.0 ENSXETT00000068652 X. tropicalis
ENSEMBL 10.0 ENSXETT00000104464 X. tropicalis
ENSEMBL 10.0 ENSXETT00000062056 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107999 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112634 X. tropicalis
ENSEMBL 10.0 ENSXETT00000062994 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091913 X. tropicalis
ENSEMBL 10.0 ENSXETT00000084768 X. tropicalis
ENSEMBL 10.0 ENSXETT00000088005 X. tropicalis
NCBI 10.0 mRNA080009 X. tropicalis
Xenbase 9.2 rna76452 X. laevis.L
Xenbase 9.2 rna20285 X. laevis.S
JGI 9.1 Xelaev18002565m X. laevis.S
ENSEMBL 9.1 ENSXETT00000062056 X. tropicalis
ENSEMBL 9.1 ENSXETT00000062994 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068652 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081261 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084768 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087664 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088005 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091913 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104464 X. tropicalis
ENSEMBL 9.1 ENSXETT00000105072 X. tropicalis
Xenbase 9.1 rna50693 X. tropicalis
JGI 9.1 Xelaev18001807m X. laevis.L
JGI 7.1 Xetro.D02554.1 X. tropicalis
JGI 6.0 XeXenL6RMv10019257m X. laevis.L
JGI 4.1 gw1.836.58.1 X. tropicalis
JGI 4.1 gw1.836.59.1 X. tropicalis
JGI 4.1 gw1.836.94.1 X. tropicalis
JGI 4.1 gw1.836.96.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_8360010 X. tropicalis
JGI 4.1 e_gw1.836.59.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_8360007 X. tropicalis
JGI 4.1 e_gw1.836.96.1 X. tropicalis
JGI 4.1 e_gw1.836.58.1 X. tropicalis
JGI 4.1 e_gw1.836.94.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8360059 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8360096 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8360094 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_836000007 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
XM_002941737 X. tropicalis
XM_004914180 X. tropicalis
XM_012961791 X. tropicalis
XM_018240399 X. laevis.L
IMAGE:6643587 BC130187 X. laevis.S
XM_041561870 X. laevis.S
XM_041561871 X. laevis.S

ESTs (12)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas102g20 AL964990 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7640514 CX793875 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646017 CX803003 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647609 CX805805 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
CAAN12056 CX928430 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8928727 EL676953 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8928727 EL676952 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
TGas102g20 BX753424 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAN12056 CX928429 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7646017 CX803002 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647609 CX805804 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
XL057o06 BJ075545 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25