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gpixenopus somite [+] 

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Experiment details for gpi

Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development.

Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development.

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Gene Clone Species Stages Anatomy
gpi tropicalis NF stage 28 somite

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  Fig S6 – Temporal synexpression and gene ontology in Clutch A PolyA+, related to Fig 4. (A) Sliding window gene ontology enrichment. Bottom: Heatmap of all genes (Fig 4) arranged by similarity. Middle: The location of all transcripts factors, blue line marks the number of transcription factors per 500 gene window. Red line marks the expected number of transcripts for any 500 gene window. Top: -log(p) chi-squared test for the association between the window position and the transcription factor density. A region that exceeds –log(p) > 5 is considered for annotation (Supplemental Experimental Procedures). (B) Somite Synexpression. Examples from the somite temporal synexpresssion group. Ranks give similarity to ckb between 34-66 hpf (Supplemental Experimental Procedures). Image source given at bottom.