|
Gene |
Clone |
Species |
Stages |
Anatomy |
sh2d3c.L
|
|
laevis
|
NF stage 13
|
chordal neural plate
,
neural plate
,
anterior neural ridge
|
sh2d3c.L
|
|
laevis
|
NF stage 16
|
pre-chordal neural plate
,
chordal neural plate
,
eye primordium
,
neural plate
|
sh2d3c.L
|
|
laevis
|
NF stage 19
|
pre-chordal neural plate
,
chordal neural plate
,
optic vesicle
,
neural plate
|
sh2d3c.L
|
|
laevis
|
NF stage 27
|
retina
,
brain
,
forebrain
,
midbrain
,
hindbrain
,
[+]
|
sh2d3c.L
|
|
laevis
|
NF stage 33 and 34
|
retina
,
head region
,
eye
|
sh2d3c.L
|
|
laevis
|
NF stage 42
|
retina
,
retinal neural layer
,
retinal outer plexiform layer
,
retinal inner plexiform layer
|
Display additional annotations [+]
Gene |
Clone |
Species |
Stages |
Anatomy |
tcf3
|
|
laevis
|
NF stage 13
|
pre-chordal neural plate
,
chordal neural plate
,
neural plate
|
tcf3
|
|
laevis
|
NF stage 16
|
pre-chordal neural plate
,
chordal neural plate
,
neural groove
,
neural plate
,
anterior neural fold
|
tcf3
|
|
laevis
|
NF stage 19
|
pre-chordal neural plate
,
chordal neural plate
,
neural crest
,
optic vesicle
,
neural plate
,
[+]
|
tcf3
|
|
laevis
|
NF stage 27
|
head region
,
neural crest
,
branchial arch
,
optic vesicle
,
cranial neural crest
|
tcf3
|
|
laevis
|
NF stage 33 and 34
|
otic vesicle
,
retina
,
brain
,
forebrain
,
midbrain
,
[+]
|
tcf3
|
|
laevis
|
NF stage 42
|
retina
,
ciliary marginal zone
|
hey1
|
|
laevis
|
NF stage 13
|
axial mesoderm
|
hey1
|
|
laevis
|
NF stage 16
|
presomitic mesoderm
,
axial mesoderm
,
paraxial mesoderm
|
hey1
|
|
laevis
|
NF stage 19
|
presomitic mesoderm
,
axial mesoderm
,
paraxial mesoderm
,
head somite
,
head somite 1
,
[+]
|
hey1
|
|
laevis
|
NF stage 27
|
hindbrain
,
neural crest
,
somite
,
optic vesicle
,
head somite
,
[+]
|
hey1
|
|
laevis
|
NF stage 33 and 34
|
hindbrain
,
mandibular crest
,
hyoid crest
,
somite
,
eye
,
[+]
|
rbfox2
|
|
laevis
|
NF stage 13
|
pre-chordal neural plate border
,
chordal neural plate border
|
rbfox2
|
|
laevis
|
NF stage 16
|
pre-chordal neural plate
,
chordal neural plate
,
neural plate
,
anterior neural fold
,
neural fold
|
rbfox2
|
|
laevis
|
NF stage 19
|
pre-chordal neural plate
,
chordal neural plate
,
neural plate
,
anterior neural fold
,
neural fold
|
rbfox2
|
|
laevis
|
NF stage 27
|
forebrain
,
telencephalon
,
neural crest
,
somite
,
optic vesicle
,
[+]
|
rbfox2
|
|
laevis
|
NF stage 33 and 34
|
retina
,
forebrain
,
telencephalon
,
hyoid crest
,
neural crest
,
[+]
|
rbfox2
|
|
laevis
|
NF stage 42
|
lens
,
retina
,
ciliary marginal zone
,
eye
,
retinal neural layer
,
[+]
|
rax
|
|
laevis
|
NF stage 13
|
pre-chordal neural plate
,
optic field
|
rax
|
|
laevis
|
NF stage 16
|
pre-chordal neural plate
,
eye primordium
|
rax
|
|
laevis
|
NF stage 19
|
retina
,
optic vesicle
|
rax
|
|
laevis
|
NF stage 27
|
retina
,
pineal gland
,
optic vesicle
|
rax
|
|
laevis
|
NF stage 33 and 34
|
retina
,
pineal gland
,
eye
|
rax
|
|
laevis
|
NF stage 42
|
retina
,
ciliary marginal zone
,
retinal neural layer
|
fat1
|
|
laevis
|
NF stage 13
|
pre-chordal neural plate
,
neural groove
,
neural plate
,
optic field
,
neural plate border
,
[+]
|
fat1
|
|
laevis
|
NF stage 16
|
pre-chordal neural plate
,
eye primordium
,
neural groove
,
neural plate
|
fat1
|
|
laevis
|
NF stage 19
|
pre-chordal neural plate
,
optic vesicle
,
neural groove
,
neural plate
|
fat1
|
|
laevis
|
NF stage 27
|
otic vesicle
,
spinal cord
,
head region
,
optic vesicle
,
head mesenchyme
|
fat1
|
|
laevis
|
NF stage 33 and 34
|
retina
,
spinal cord
,
head region
,
eye
,
pronephric kidney
,
[+]
|
fat1
|
|
laevis
|
NF stage 42
|
retina
,
retinal outer plexiform layer
,
retinal inner plexiform layer
|
slc25a17
|
|
laevis
|
NF stage 13
|
chordal neural plate
,
neural plate
,
neural plate border
|
slc25a17
|
|
laevis
|
NF stage 16
|
pre-chordal neural plate
,
chordal neural plate
,
cement gland primordium
,
neural plate
,
neural plate border
,
[+]
|
slc25a17
|
|
laevis
|
NF stage 19
|
pre-chordal neural plate
,
chordal neural plate
,
cement gland primordium
,
neural plate
,
neural plate border
|
slc25a17
|
|
laevis
|
NF stage 27
|
otic vesicle
,
head region
,
neural crest
,
cement gland primordium
,
lateral plate mesoderm
,
[+]
|
slc25a17
|
|
laevis
|
NF stage 33 and 34
|
otic vesicle
,
neural crest
,
eye
,
lateral plate mesoderm
,
cranial neural crest
|
slc25a17
|
|
laevis
|
NF stage 42
|
lens
,
retina
,
ciliary marginal zone
,
lens fiber cell mass
|
nek2
|
|
laevis
|
NF stage 16
|
pre-chordal neural plate
,
eye primordium
,
neural plate
|
nek2
|
|
laevis
|
NF stage 19
|
pre-chordal neural plate
,
optic vesicle
,
neural plate
,
neural plate border
|
nek2
|
|
laevis
|
NF stage 27
|
otic vesicle
,
optic vesicle
|
nek2
|
|
laevis
|
NF stage 33 and 34
|
head region
|
nek2
|
|
laevis
|
NF stage 42
|
lens
,
retina
,
ciliary marginal zone
,
eye
,
retinal neural layer
,
[+]
|
bzw2
|
|
laevis
|
NF stage 13
|
pre-chordal neural plate
,
neural plate
,
anterior neural ridge
|
bzw2
|
|
laevis
|
NF stage 16
|
pre-chordal neural plate
,
neural groove
,
neural plate
,
anterior neural fold
,
neural plate border
,
[+]
|
bzw2
|
|
laevis
|
NF stage 19
|
branchial crest
,
pre-chordal neural plate
,
chordal neural plate
,
optic vesicle
,
neural groove
,
[+]
|
bzw2
|
|
laevis
|
NF stage 27
|
retina
,
neural crest
,
optic vesicle
,
cranial neural crest
|
bzw2
|
|
laevis
|
NF stage 33 and 34
|
mandibular crest
,
hyoid crest
,
endoderm
,
cranial neural crest
,
olfactory bulb
|
bzw2
|
|
laevis
|
NF stage 42
|
retina
,
ciliary marginal zone
|
efnb1
|
|
laevis
|
NF stage 13
|
pre-chordal neural plate
,
chordal neural plate
,
neural plate
|
efnb1
|
|
laevis
|
NF stage 16
|
neural crest
,
eye primordium
,
anterior neural fold
,
cranial neural crest
,
pre-chordal neural plate border
,
[+]
|
efnb1
|
|
laevis
|
NF stage 19
|
pre-chordal neural plate
,
neural crest
,
optic vesicle
,
neural plate
,
cranial neural crest
|
efnb1
|
|
laevis
|
NF stage 27
|
forebrain
,
telencephalon
,
head region
,
neural crest
,
lateral plate mesoderm
,
[+]
|
efnb1
|
|
laevis
|
NF stage 33 and 34
|
head region
,
neural crest
,
lateral plate mesoderm
,
cranial neural crest
,
liver primordium
|
efnb1
|
|
laevis
|
NF stage 42
|
retina
,
ciliary marginal zone
,
retinal neural layer
|
rab11fip4
|
|
laevis
|
NF stage 13
|
pre-chordal neural plate
,
chordal neural plate
,
neural plate
,
neural plate border
|
rab11fip4
|
|
laevis
|
NF stage 16
|
pre-chordal neural plate
,
chordal neural plate
,
eye primordium
,
neural plate
|
rab11fip4
|
|
laevis
|
NF stage 19
|
pre-chordal neural plate
,
chordal neural plate
,
optic vesicle
,
neural plate
|
rab11fip4
|
|
laevis
|
NF stage 27
|
hindbrain
,
pineal gland
,
optic vesicle
|
rab11fip4
|
|
laevis
|
NF stage 33 and 34
|
retina
,
forebrain
,
telencephalon
,
hindbrain
,
eye
|
|
|
Figure 2. Expression pattern of genes regulated by Rx1. In situ hybridizations performed on whole mount (stage 13, early neurula; stage 16, mid-neurula; stage 19, late neurula; stage 27, early tailbud; stage 33, late tailbud), and on cryo-sections (stage 42, early tadpole, detail of the retina). Stage 13–19 embryos are frontal views with dorsal to the top. Stage 27 and 33 embryos are lateral views with dorsal to the top and anterior to the left.Download figure to PowerPoint |