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Gene/Clone	Species	Stage	Anatomy Item	Experimenter
irx1	xenopus		pre-chordal neural plate [+] anterior neural fold,optic field,pre-chordal neural plate border,Muller cell,accessory olfactory bulb,adenohypophysis,amacrine cell,amygdala,anterior amygdala,anterior commissure,anterior entopeduncular nucleus,anterior entopeduncular region,anterior hypothalamus,anterior tectum,anterior thalamic nucleus,anterodorsal tegmental nucleus,anteroventral tegmental nucleus,basal forebrain,basal ganglion,bed nucleus of the stria terminalis,bipolar neuron,caudal tuberal region,cell body layer of the optic tectum,central amygdala,central nucleus of the thalamus,central retina,choroid,choroid fissure,ciliary body,ciliary marginal zone,conjunctiva,cornea,diencephalon,dorsal habenular nucleus,dorsal pallidum,dorsal pallium,dorsal septum,dorsal tegmentum,dorsal telencephalon,dorsal thalamus,eminentia thalami,external plexiform layer of the olfactory bulb,eye photoreceptor cell,globe,glomerular layer of the olfactory bulb,granule cell,granule cell layer of the olfactory bulb,habenula,horizontal cell,hypophysis,hypothalamus,infundibulum,inner limiting membrane,iris,lateral amygdala,lateral forebrain bundle,lateral ganglionic eminence,lateral hypothalamic nucleus,lateral pallium,lateral septum,laterodorsal tegmental nucleus,lens,lens epithelium,lens fiber cell mass,lens placode,lens transitional zone,lower eyelid,magnocellular preoptic nucleus,mammilary region,medial amygdala,medial ganglionic eminence,medial pallium,medial septum,melanotrope,mesencephalic artery,mesencephalic vein,midbrain tegmentum,mitral cell,mitral cell layer of the olfactory bulb,neurohypophysis,neuropil of the optic tectum,nucleus accumbens,nucleus of the diagonal band,oculomotor motornucleus,olfactory bulb,optic chiasm,optic disc,optic fiber layer,optic nerve,optic stalk,optic tectum,optic tract,outer limiting membrane,pallidum,pallium,pars distalis,pars intermedia,pars nervosa,peripheral retina,photoreceptor layer,pigment layer,pineal gland,posterior commissure,posterior hypothalamus,posterior tectum,posterodorsal tegmental nucleus,posteroventral tegmental nucleus,preoptic area,pretectum,prethalamus,prethalamus basal plate,prosomere,prosomere 4,prosomere 5,prosomere 6,pupil,radial glial cell,retina,retinal ganglion cell,retinal ganglion cell layer,retinal inner nuclear layer,retinal inner plexiform layer,retinal layer,retinal neural layer,retinal outer nuclear layer,retinal outer plexiform layer,retinal pigmented epithelium,retinal progenitor cell,retinal progenitor cell region,retinal stem cell,retinal stem cell region,retromammillary area,rostral tuberal region,sclera,striatum,subcommissural organ,subpallium,subthalamic nucleus,suprachiasmatic nucleus,supraoptoparaventricular region,telencephalon,telencephalon septum,thalamus,third ventricle,torus semicircularis,trochlear motornucleus,tuberal region,ventral habenular nucleus,ventral hypothalamic nucleus,ventral pallidum,ventral pallium,ventral septum,ventral tegmentum,ventricular layer of the optic tectum,ventrolateral thalamic nucleus,ventromedial thalamic nucleus,zona limitans intrathalamica,anterior neural tube,choroid fissure,eye,eye primordium,forebrain,iris,midbrain,optic nerve,optic stalk,optic tectum,optic vesicle

Too many results?Too few results?

Expression summary for irx1

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Experiment	Species	Images	Stages	Anatomy	Assay
Schlosser G and Ahrens K (2004) Assay Paper	laevis	3 images	NF stage 13 to NF stage 27	lens placode, midbrain	in situ hybridization
Alarcón P et al. (2009) Assay Paper	laevis	1 image	NF stage 22 to NF stage 29 and 30	anterior neural tube, eye	in situ hybridization
Rodríguez-Seguel E et al. (2009) Assay Paper	laevis	3 images	NF stage 14 to NF stage 26	diencephalon, midbrain, pre-chordal neural plate	in situ hybridization
Harland Lab Assay Harland Lab	tropicalis	2 images	NF stage 28 to NF stage 42	forebrain, midbrain, telencephalon	in situ hybridization
Paper	xenopus	1 image	NF stage 14	anterior neural fold	in situ hybridization
The competence of Xenopus blastomeres to produce neural and retinal progeny is repressed by two endo-mesoderm promoting pathw... Paper	laevis	1 image	NF stage 14 to NF stage 15	retina	in situ hybridization
The homeoprotein Xiro1 is required for midbrain-hindbrain boundary formation. Paper	laevis	1 image	NF stage 12 to NF stage 18	midbrain	in situ hybridization
The prepattern transcription factor Irx3 directs nephron segment identity. Paper	laevis	1 image	NF stage 35 and 36	eye	in situ hybridization
Juraver-Geslin HA et al. (2014) Assay Paper	laevis	4 images	NF stage 29 and 30 to NF stage 32	forebrain, prosomere, thalamus	in situ hybridization
Pa2G4 is a novel Six1 co-factor that is required for neural crest and otic development. Paper	laevis	1 image	NF stage 18 to NF stage 28	midbrain, pre-chordal neural plate	in situ hybridization
Pa2G4 is a novel Six1 co-factor that is required for neural crest and otic development. Paper	laevis	1 image	NF stage 18	pre-chordal neural plate	in situ hybridization
Pa2G4 is a novel Six1 co-factor that is required for neural crest and otic development. Paper	laevis	1 image	NF stage 28	midbrain	in situ hybridization
Soeren S Lienkamp	laevis	1 image	NF stage 33 and 34	eye	in situ hybridization

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