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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
lhx1	xenopus		endoderm [+] hypochord,head endoderm,archenteron,archenteron floor,gastrocoel roof plate,post-anal gut,central endoderm,endodermal cell,vegetal endoderm,suprablastoporal endoderm,sub-blastoporal endoderm,dorsal endoderm,pharyngeal endoderm,hindgut primordium,midgut primordium,foregut endoderm,dorsal crest of the endoderm,monociliated cell,archenteron roof midline,left-right organizer primordium,left-right organizer,ventral endoderm,posterior endoderm,anterior endoderm,Roux spot,acinar cell,alpha cell,anterior foregut,anterior hindgut endoderm,antrum,archenteron floor,archenteron roof midline,beta cell,blastopore lip,capillary system of liver,cardia,colon,delta cell,distal stomach,dorsal endoderm,dorsal foregut,dorsal pancreatic bud,dorsal posterior hindgut endoderm,duodenum,enteric neuron,epsilon cell,exocrine pancreas,external coil of the small intestine,fasciculated network of fibrils,first pancreatic bud,foregut epithelium,fundus,gall bladder,gall bladder primordium,gamma cell,gastrocoel roof plate,germinal vesicle,hepato-pancreatic progenitor cell,hepatocyte,hindgut endoderm,ileum,internal coil of the small intestine,intestinal stem cell,islets of Langerhans,left-right organizer,left-right organizer primordium,liver diverticulum,liver parenchyme,liver primordium,lower blastopore lip,lung bud,lung primordium,mitochondrial cloud,monociliated cell,oocyte cortex,ooplasm,post-anal gut,posterior foregut,posterior hindgut endoderm,proximal stomach,pulmonary epithelium,pyloric sphincter,pylorus,rectum,ring structure,second pancreatic bud,stomach,stomach body,stomach epithelium,subcortical cytoplasm,tracheoesophageal fold,tracheoesophageal septum,transient tracheoesophageal septum,upper blastopore lip,vegetal cortex,ventral foregut,ventral posterior hindgut endoderm,wedge region,yolk platelet,anterior endoderm,anterior hindgut endoderm,archenteron,bile duct,biliary tree,blastopore,buccopharyngeal membrane,central endoderm,cloacal sphincter,dorsal endoderm,dorsal pancreatic bud,dorsal posterior hindgut endoderm,egg,first pancreatic bud,foregut,foregut endoderm,foregut epithelium,gall bladder,gall bladder primordium,head endoderm,hepato-pancreatic duct,hepato-pancreatic progenitor cell,hindgut,hindgut endoderm,hindgut primordium,hypochord,islets of Langerhans,large intestine,left-right organizer,liver,liver diverticulum,liver parenchyme,liver primordium,lung,lung bud,lung primordium,midgut,midgut primordium,oocyte,oral evagination,pancreas,pharyngeal cavity,pharyngeal endoderm,pharyngeal pouch,polar body,posterior endoderm,posterior hindgut endoderm,primary oogonium,primary spermatogonium,primordial germ cell,proctodeum,pyloric sphincter,second pancreatic bud,secondary oogonium,secondary spermatogonium,small intestine,spermatid,spermatocyte,spermatozoon,stomach,stomach epithelium,sub-blastoporal endoderm,suprablastoporal endoderm,taste bud,thyroid,thyroid primordium,urostyle,ventral endoderm,ventral pancreatic bud,ventral posterior hindgut endoderm,visceral pouch

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Expression summary for lhx1

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Experiment	Species	Images	Stages	Anatomy	Assay
Yasuo H and Lemaire P (2001) Assay Paper	laevis	1 image	NF stage 10.5	upper blastopore lip	in situ hybridization
Zorn Xl.32655_lhx1 Assay Zorn Lab	laevis	1 image	NF stage 10.5	blastopore, blastopore lip	in situ hybridization
Xenopus ADAMTS1 negatively modulates FGF signaling independent of its metalloprotease activity. Paper	laevis	1 image	NF stage 10.5	blastopore lip, upper blastopore lip	in situ hybridization
A comparative analysis of frog early development. Paper	laevis	1 image	NF stage 10.5	upper blastopore lip	in situ hybridization
Comparison of Lim1 expression in embryos of frogs with different modes of reproduction. Paper	laevis	1 image	NF stage 10.25 to NF stage 10.5	upper blastopore lip	immunohistochemistry
Comparison of Lim1 expression in embryos of frogs with different modes of reproduction. Paper	laevis	1 image	NF stage 10.25 to NF stage 10.5	upper blastopore lip	in situ hybridization
Dynamic in vivo binding of transcription factors to cis-regulatory modules of cer and gsc in the stepwise formation of the Sp... Paper	laevis	2 images	NF stage 9 to NF stage 10.5	blastopore lip, endoderm	in situ hybridization
Genomic analysis of Xenopus organizer function. Paper	laevis	1 image	NF stage 10.5 to NF stage 11.5	upper blastopore lip	in situ hybridization
Tiki1 is required for head formation via Wnt cleavage-oxidation and inactivation. Paper	laevis	1 image	NF stage 10.5 to NF stage 11	upper blastopore lip	in situ hybridization
Xenopus brain factor-2 controls mesoderm, forebrain and neural crest development. Paper	laevis	1 image	NF stage 10.5 to NF stage 11.5	upper blastopore lip	in situ hybridization
Analysis of the developing Xenopus tail bud reveals separate phases of gene expression during determination and outgrowth. Paper	laevis	1 image	NF stage 14	upper blastopore lip	in situ hybridization
Beck CW and Slack JM (1998) Assay Paper	laevis	1 image	NF stage 14	upper blastopore lip	in situ hybridization
Kam RK et al. (2013) Assay Paper	laevis	1 image	NF stage 10.25	upper blastopore lip	in situ hybridization
Yasuoka Y et al. (2014) Assay Paper	laevis	1 image	NF stage 10.5	upper blastopore lip	in situ hybridization
Blumberg_Cho dorsal blastopore lip Unigene laevis cDNA library Xenopus IMAGE cDNA Library	laevis		NF stage 7 to NF stage 9	upper blastopore lip	cDNA Library

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