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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
lhx2	xenopus		pre-chordal neural plate [+] anterior neural fold,optic field,pre-chordal neural plate border,Muller cell,accessory olfactory bulb,adenohypophysis,amacrine cell,amygdala,anterior amygdala,anterior commissure,anterior entopeduncular nucleus,anterior entopeduncular region,anterior hypothalamus,anterior tectum,anterior thalamic nucleus,anterodorsal tegmental nucleus,anteroventral tegmental nucleus,basal forebrain,basal ganglion,bed nucleus of the stria terminalis,bipolar neuron,caudal tuberal region,cell body layer of the optic tectum,central amygdala,central nucleus of the thalamus,central retina,choroid,choroid fissure,ciliary body,ciliary marginal zone,conjunctiva,cornea,diencephalon,dorsal habenular nucleus,dorsal pallidum,dorsal pallium,dorsal septum,dorsal tegmentum,dorsal telencephalon,dorsal thalamus,eminentia thalami,external plexiform layer of the olfactory bulb,eye photoreceptor cell,globe,glomerular layer of the olfactory bulb,granule cell,granule cell layer of the olfactory bulb,habenula,horizontal cell,hypophysis,hypothalamus,infundibulum,inner limiting membrane,iris,lateral amygdala,lateral forebrain bundle,lateral ganglionic eminence,lateral hypothalamic nucleus,lateral pallium,lateral septum,laterodorsal tegmental nucleus,lens,lens epithelium,lens fiber cell mass,lens placode,lens transitional zone,lower eyelid,magnocellular preoptic nucleus,mammilary region,medial amygdala,medial ganglionic eminence,medial pallium,medial septum,melanotrope,mesencephalic artery,mesencephalic vein,midbrain tegmentum,mitral cell,mitral cell layer of the olfactory bulb,neurohypophysis,neuropil of the optic tectum,nucleus accumbens,nucleus of the diagonal band,oculomotor motornucleus,olfactory bulb,optic chiasm,optic disc,optic fiber layer,optic nerve,optic stalk,optic tectum,optic tract,outer limiting membrane,pallidum,pallium,pars distalis,pars intermedia,pars nervosa,peripheral retina,photoreceptor layer,pigment layer,pineal gland,posterior commissure,posterior hypothalamus,posterior tectum,posterodorsal tegmental nucleus,posteroventral tegmental nucleus,preoptic area,pretectum,prethalamus,prethalamus basal plate,prosomere,prosomere 4,prosomere 5,prosomere 6,pupil,radial glial cell,retina,retinal ganglion cell,retinal ganglion cell layer,retinal inner nuclear layer,retinal inner plexiform layer,retinal layer,retinal neural layer,retinal outer nuclear layer,retinal outer plexiform layer,retinal pigmented epithelium,retinal progenitor cell,retinal progenitor cell region,retinal stem cell,retinal stem cell region,retromammillary area,rostral tuberal region,sclera,striatum,subcommissural organ,subpallium,subthalamic nucleus,suprachiasmatic nucleus,supraoptoparaventricular region,telencephalon,telencephalon septum,thalamus,third ventricle,torus semicircularis,trochlear motornucleus,tuberal region,ventral habenular nucleus,ventral hypothalamic nucleus,ventral pallidum,ventral pallium,ventral septum,ventral tegmentum,ventricular layer of the optic tectum,ventrolateral thalamic nucleus,ventromedial thalamic nucleus,zona limitans intrathalamica,anterior neural tube,choroid fissure,eye,eye primordium,forebrain,iris,midbrain,optic nerve,optic stalk,optic tectum,optic vesicle

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Expression summary for lhx2

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Experiment	Species	Images	Stages	Anatomy	Assay
Viczian AS et al. (2006) Assay Paper	laevis	1 image	NF stage 25	anterior neural tube, eye, pineal gland, retina	in situ hybridization
Rorick AM et al. (2007) Assay Paper	xenopus	1 image	NF stage 14	eye primordium	in situ hybridization
Atkinson-Leadbeater K et al. (2009) Assay Paper	laevis	1 image	NF stage 18 to NF stage 33 and 34	diencephalon, eye, eye primordium, midbrain, optic vesicle, [+] pineal gland, retina, telencephalon	in situ hybridization
Zuber ME et al. (2003) Assay Paper	xenopus	1 image	NF stage 13 to NF stage 20	eye, eye primordium, optic vesicle	in situ hybridization
Zuber ME et al. (2003) Assay Paper	laevis	1 image	NF stage 13 to NF stage 20	eye primordium	in situ hybridization
Viczian AS et al. (2006) Assay Paper	laevis	2 images	NF stage 12.5 to NF stage 41	ciliary marginal zone, eye, eye primordium, forebrain, optic stalk, [+] optic vesicle, retinal ganglion cell layer, retinal inner nuclear layer, retinal neural layer, retinal outer nuclear layer, retinal pigmented epithelium	in situ hybridization
Qiu R et al. (2009) Assay Paper	laevis	1 image	NF stage 13 to NF stage 33 and 34	diencephalon, eye primordium, midbrain, pre-chordal neural plate, retina, [+] telencephalon	in situ hybridization
Paper	xenopus	1 image	NF stage 14	eye primordium	in situ hybridization
Expression of the forkhead transcription factor FoxN4 in progenitor cells in the developing Xenopus laevis retina and brain. Paper	laevis	1 image	NF stage 45	optic tectum	in situ hybridization
LIM-homeodomain genes as developmental and adult genetic markers of Xenopus forebrain functional subdivisions. Paper	laevis	1 image	adult frog stage	anterior thalamic nucleus, diencephalon, dorsal habenular nucleus, forebrain, habenula, [+] medial pallium, pallium, thalamus, ventral habenular nucleus	in situ hybridization
LIM-homeodomain genes as developmental and adult genetic markers of Xenopus forebrain functional subdivisions. Paper	laevis	1 image	NF stage 42 to NF stage 55	anterior thalamic nucleus, diencephalon, dorsal habenular nucleus, forebrain, habenula, [+] optic tectum, pallium, prosomere, prosomere 4, subpallium, thalamus, ventral habenular nucleus, ventral pallium	in situ hybridization
Xenopus mutant reveals necessity of rax for specifying the eye field which otherwise forms tissue with telencephalic and die... Paper	tropicalis	1 image	NF stage 15 to NF stage 24	diencephalon, eye, eye primordium, optic vesicle, pre-chordal neural plate, [+] retina	in situ hybridization
Expression of Xenopus laevis Lhx2 during eye development and evidence for divergent expression among vertebrates. Paper	laevis	1 image	NF stage 35 and 36	ciliary marginal zone, diencephalon, eye, forebrain, optic stalk, [+] pineal gland, retina, retinal inner nuclear layer, telencephalon	in situ hybridization
Expression of Xenopus laevis Lhx2 during eye development and evidence for divergent expression among vertebrates. Paper	laevis	1 image	NF stage 35 and 36	ciliary marginal zone, eye, retina, retinal inner nuclear layer	in situ hybridization
Expression of Xenopus laevis Lhx2 during eye development and evidence for divergent expression among vertebrates. Paper	laevis	1 image	NF stage 41	ciliary marginal zone, eye, retina, retinal inner nuclear layer	in situ hybridization
Expression of Xenopus laevis Lhx2 during eye development and evidence for divergent expression among vertebrates. Paper	laevis	1 image	NF stage 15	optic field	in situ hybridization
Expression of Xenopus laevis Lhx2 during eye development and evidence for divergent expression among vertebrates. Paper	laevis	1 image	NF stage 18	eye primordium	in situ hybridization
FGF receptor dependent regulation of Lhx9 expression in the developing nervous system. Xenbase Image	laevis	1 image	NF stage 33 and 34	diencephalon, eye, forebrain, midbrain, optic stalk, [+] pineal gland, retina, telencephalon	in situ hybridization
Fish MB et al. (2015) Assay Paper	tropicalis	1 image	NF stage 18 to NF stage 21	diencephalon, eye, eye primordium, optic vesicle, pre-chordal neural plate, [+] retina	in situ hybridization
Zhang S et al. (2014) Assay Paper	laevis	2 images	NF stage 15 to NF stage 35 and 36	anterior neural fold, diencephalon, eye, forebrain, midbrain, [+] optic vesicle, pineal gland, retina	in situ hybridization
The Lhx9-integrin pathway is essential for positioning of the proepicardial organ. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 46	eye, forebrain, midbrain, pineal gland, retina	in situ hybridization
Moreno N and González A (2017) Assay	laevis	3 images	NF stage 37 and 38 to NF stage 56	dorsal pallium, medial pallium, pallium, striatum, telencephalon septum, [+] ventral pallium	immunohistochemistry
LIM-homeodomain genes as developmental and adult genetic markers of Xenopus forebrain functional subdivisions. Paper	laevis	1 image	adult frog stage	amygdala, anterior thalamic nucleus, bed nucleus of the stria terminalis, central nucleus of the thalamus, diencephalon, [+] dorsal habenular nucleus, forebrain, habenula, hypothalamus, lateral hypothalamic nucleus, lateral pallium, medial amygdala, medial pallium, pallium, preoptic area, pretectum, telencephalon septum, thalamus, ventral habenular nucleus, ventral hypothalamic nucleus, ventral pallium, ventral septum	in situ hybridization
LIM-homeodomain genes as developmental and adult genetic markers of Xenopus forebrain functional subdivisions. Paper	laevis	1 image	adult frog stage	amygdala, anterior thalamic nucleus, central nucleus of the thalamus, dorsal habenular nucleus, forebrain, [+] habenula, lateral amygdala, medial amygdala, medial pallium, pallium, preoptic area, pretectum, suprachiasmatic nucleus, thalamus, ventral habenular nucleus, ventrolateral thalamic nucleus, ventromedial thalamic nucleus	in situ hybridization

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