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Gene/Clone	Species	Stage	Anatomy Item	Experimenter
nog	xenopus		embryo [+] pronephric nephrostome,pronephric duct,animal blastomere,animal hemisphere,germ plasm,vegetal blastomere,vegetal hemisphere,pronephric nephron,late proximal tubule,early distal tubule,early proximal tubule,late distal tubule,glomus,pronephric sinus,pronephric kidney,primary germ layer,blastomere,embryonic structure,podocyte,early embryonic cell,animal pole,pronephric tubule,vegetal pole,glomeral nexus,proximal tubule,distal tubule,proximal tubule branch,coelom,glomerular mesangial cell,glomerular epithelial cell,germinal granule,prime meridian,Roux spot,fasciculated network of fibrils,germinal vesicle,mitochondrial cloud,oocyte cortex,ooplasm,ring structure,subcortical cytoplasm,vegetal cortex,wedge region,yolk platelet,anatomical group,anatomical region,anatomical space,animal blastomere,blastomere D1,blastomere D1.1,blastomere D1.1.1,blastomere D1.1.2,blastomere D1.2,blastomere D1.2.1,blastomere D1.2.2,blastomere D2,blastomere D2.1,blastomere D2.1.1,blastomere D2.1.2,blastomere D2.2,blastomere D2.2.1,blastomere D2.2.2,blastomere V1,blastomere V1.1,blastomere V1.1.1,blastomere V1.1.2,blastomere V1.2,blastomere V1.2.1,blastomere V1.2.2,blastomere V2,blastomere V2.1,blastomere V2.1.1,blastomere V2.1.2,blastomere V2.2,blastomere V2.2.1,blastomere V2.2.2,egg,embryonic structure,glomeral nexus,mesonephric duct,multicellular anatomical structure,oocyte,polar body,primary oogonium,primary spermatogonium,primordial germ cell,process,secondary oogonium,secondary spermatogonium,spermatid,spermatocyte,spermatozoon,vegetal blastomere

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Expression summary for nog

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Experiment	Species	Images	Stages	Anatomy	Assay
Harland lab in situ screen Assay Harland lab in situ screen	tropicalis	1 image	NF stage 14	axial mesoderm, notochord	in situ hybridization
Harland lab in situ screen Assay Harland lab in situ screen	tropicalis	1 image	NF stage 17 to NF stage 18	anterior neural fold, axial mesoderm, notochord	in situ hybridization
Harland lab in situ screen Assay Harland lab in situ screen	tropicalis	1 image	NF stage 26	notochord, pharyngeal arch	in situ hybridization
Beck CW et al. (2009) Assay Paper	laevis	1 image	NF stage 35 and 36 to NF stage 54	cartilage tissue, hindlimb, hindlimb digit, neural tube, non-mineralized cartilage tissue, [+] notochord, posterior neural tube, regenerating tail, roof plate, tail tip	in situ hybridization
Khokha MK et al. (2005) Assay Paper	tropicalis	1 image	NF stage 8 to NF stage 11	dorsal marginal zone, involuted dorsal mesoderm	in situ hybridization
Fletcher RB and Harland RM (2008) Assay Paper	laevis	2 images	NF stage 10 to NF stage 18	axial mesoderm, dorsal marginal zone, notochord, upper blastopore lip	in situ hybridization
Delaune E et al. (2005) Assay Paper	laevis	1 image	NF stage 10.5	dorsal marginal zone	in situ hybridization
Galli A et al. (2003) Assay Paper	laevis	2 images	NF stage 10.5 to NF stage 12	endoderm, endomesoderm, neuroectoderm inner layer, neuroectoderm outer layer	in situ hybridization
Dichmann DS et al. (2008) Assay Paper	laevis	1 image	NF stage 14	anterior neural fold, axial mesoderm, neural groove	in situ hybridization
Harland Lab Assay Harland Lab	tropicalis	1 image	NF stage 37 and 38	brain, head region, notochord, otic vesicle, pharyngeal arch	in situ hybridization
Multiple noggins in vertebrate genome: cloning and expression of noggin2 and noggin4 in Xenopus laevis. Paper	laevis	1 image	NF stage 10.5	presumptive axial mesoderm	in situ hybridization
Expression of Xenopus tropicalis noggin1 and noggin2 in early development: two noggin genes in a tetrapod. Paper	tropicalis	1 image	NF stage 9 to NF stage 25	anterior neural ridge, axial mesoderm, blastocoel, branchial crest, chordoneural hinge, [+] dorsal marginal zone, forebrain, mesoderm, neural tube, notochord, pharyngeal arch, presumptive axial mesoderm, roof plate	in situ hybridization
Expression of Xenopus tropicalis noggin1 and noggin2 in early development: two noggin genes in a tetrapod. Paper	tropicalis	1 image	NF stage 28 to NF stage 35 and 36	chordoneural hinge, cranial ganglion, forebrain, hindbrain, hyoid arch, [+] liver primordium, mandibular arch, neural tube, notochord, otic vesicle, pharyngeal arch, posterior neural tube, tail bud, tail tip	in situ hybridization
Knecht AK and Harland RM (1997) Assay Paper	laevis	1 image	NF stage 13	anterior placodal area, notochord, preplacodal ectoderm	in situ hybridization
Suppression of GATA factor activity causes axis duplication in Xenopus. Paper	laevis	1 image	NF stage 10.5	dorsal marginal zone	in situ hybridization
Klf4 is required for germ-layer differentiation and body axis patterning during Xenopus embryogenesis. Paper	laevis	1 image	NF stage 10.5	involuting marginal zone	in situ hybridization
The Toll/IL-1 receptor binding protein MyD88 is required for Xenopus axis formation. Paper	laevis	1 image	NF stage 10.5	dorsal marginal zone, involuted dorsal mesoderm, involuting marginal zone	in situ hybridization
Chordin is required for the Spemann organizer transplantation phenomenon in Xenopus embryos. Paper	laevis	1 image	NF stage 11 to NF stage 12	axial mesoderm, involuted dorsal mesoderm	in situ hybridization
Xenopus hairy2b specifies anterior prechordal mesoderm identity within Spemann''s organizer. Paper	laevis	1 image	NF stage 10.25	axial mesoderm	in situ hybridization
Rab3d is required for Xenopus anterior neurulation by regulating Noggin secretion. Paper	laevis	1 image	NF stage 3 (4-cell) to NF stage 15	animal blastomere, animal hemisphere, anterior placodal area, pre-chordal neural plate border	in situ hybridization
Expression cloning of noggin, a new dorsalizing factor localized to the Spemann organizer in Xenopus embryos. Paper	laevis	1 image	NF stage 9 to NF stage 40	branchial arch, dorsal marginal zone, head mesenchyme, mandibular arch, mesoderm, [+] neural groove, notochord, pharyngeal arch, prechordal plate, roof plate, spinal cord, upper blastopore lip	in situ hybridization
Involvement of BMP-4/msx-1 and FGF pathways in neural induction in the Xenopus embryo. Paper	laevis	1 image	NF stage 11	dorsal marginal zone, involuting marginal zone, upper blastopore lip	in situ hybridization
Expression of Xenopus tropicalis noggin1 and noggin2 in early development: two noggin genes in a tetrapod. Paper	laevis	1 image	NF stage 10.25	dorsal marginal zone, mesoderm	in situ hybridization
Expression of Xenopus tropicalis noggin1 and noggin2 in early development: two noggin genes in a tetrapod. Paper	tropicalis	1 image	NF stage 13 to NF stage 14	axial mesoderm	in situ hybridization
Expression of Xenopus tropicalis noggin1 and noggin2 in early development: two noggin genes in a tetrapod. Paper	tropicalis	1 image	NF stage 19	forebrain, notochord	in situ hybridization
Expression of Xenopus tropicalis noggin1 and noggin2 in early development: two noggin genes in a tetrapod. Paper	laevis	1 image	NF stage 28	forebrain, neural tube, notochord, pharyngeal arch, posterior neural tube	in situ hybridization
Expression of Xenopus tropicalis noggin1 and noggin2 in early development: two noggin genes in a tetrapod. Paper	tropicalis	1 image	NF stage 35 and 36	cranial ganglion, forebrain, liver primordium, neural tube, notochord, [+] otic vesicle, pharyngeal arch, tail bud	in situ hybridization
Ski represses bone morphogenic protein signaling in Xenopus and mammalian cells. Paper	laevis	1 image	NF stage 10.5	upper blastopore lip	in situ hybridization
Expression of Xfz3, a Xenopus frizzled family member, is restricted to the early nervous system. Paper	laevis	1 image	NF stage 10.5	upper blastopore lip	in situ hybridization
Noggin 1 overexpression in retinal progenitors affects bipolar cell generation. Paper	laevis	1 image	NF stage 15 to NF stage 42	eye, retina, retinal inner plexiform layer, retinal outer nuclear layer, retinal outer plexiform layer	immunohistochemistry
Noggin 1 overexpression in retinal progenitors affects bipolar cell generation. Paper	laevis	1 image	NF stage 15 to NF stage 42	anterior neural fold, anterior neural ridge, anterior neural tube, diencephalon, forebrain, [+] neurogenic placode, optic field, optic vesicle, pharyngeal arch, pre-chordal neural plate, retina, telencephalon	in situ hybridization
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula trans... Paper	laevis	1 image	NF stage 9	dorsal marginal zone	in situ hybridization
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula trans... Paper	laevis	1 image	NF stage 11	dorsal marginal zone	in situ hybridization
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula trans... Paper	laevis	1 image	NF stage 9	dorsal marginal zone	in situ hybridization
Transcriptomics of Dorso-Ventral Axis Determination in Xenopus tropicalis. Paper	tropicalis	1 image	NF stage 11	dorsal marginal zone	in situ hybridization
NICHD_XGC_tropTail_m Unigene tropicalis cDNA library Xenopus IMAGE cDNA Library	tropicalis		NF stage 55 to NF stage 66	tail	cDNA Library
Shibata Xenopus AEM lambda-ZAP II cDNA library Unigene laevis cDNA library	laevis		NF stage 12.5 to NF stage 13	endomesoderm	cDNA Library
Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library Unigene laevis cDNA library	laevis		NF stage 12.5	ectoderm	cDNA Library
Blumberg_Cho dorsal blastopore lip Unigene laevis cDNA library Xenopus IMAGE cDNA Library	laevis		NF stage 7 to NF stage 9	upper blastopore lip	cDNA Library
Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library Unigene laevis cDNA library	laevis		NF stage 12.5	endomesoderm	cDNA Library

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