|
Display additional annotations [+]
Gene |
Clone |
Species |
Stages |
Anatomy |
sall1
|
|
laevis
|
NF stage 18
|
floor plate
,
posterior placodal area
|
kansl2
|
|
laevis
|
NF stage 18
|
pre-chordal neural plate
,
cranial neural crest
,
optic field
|
kansl2
|
|
laevis
|
NF stage 29 and 30
|
otic vesicle
,
forebrain
,
spinal cord
,
pronephric duct
,
pharyngeal arch
,
[+]
|
zeb2
|
|
laevis
|
NF stage 14
to
NF stage 15
|
pre-chordal neural plate
,
chordal neural plate
|
zeb2
|
|
laevis
|
NF stage 29 and 30
|
hindbrain
,
spinal cord
,
eye
,
pronephric mesenchyme
,
epibranchial placode
,
[+]
|
stk3
|
|
laevis
|
NF stage 18
|
mesoderm
,
intermediate mesoderm
,
dorsal
,
lateral plate mesoderm
|
stk3
|
|
laevis
|
NF stage 29 and 30
|
dorsal fin
|
dlx5
|
|
laevis
|
NF stage 18
|
neural crest
,
preplacodal ectoderm
,
anterior placodal area
,
posterior placodal area
|
dlx5
|
|
laevis
|
NF stage 28
|
otic vesicle
,
forebrain
,
diencephalon
,
hatching gland
,
pharyngeal arch
,
[+]
|
ammecr1
|
|
laevis
|
NF stage 18
|
pre-chordal neural plate
,
chordal neural plate
|
ammecr1
|
|
laevis
|
NF stage 29 and 30
|
otic vesicle
,
brain
,
spinal cord
,
pronephric duct
,
pharyngeal arch
,
[+]
|
snrpe
|
|
laevis
|
NF stage 18
|
pre-chordal neural plate
,
cranial neural crest
,
optic field
|
snrpe
|
|
laevis
|
NF stage 28
|
otic vesicle
,
retina
,
forebrain
,
hindbrain
,
pharyngeal arch
,
[+]
|
aadat
|
|
laevis
|
NF stage 18
|
otic vesicle
,
mesoderm
,
neural plate
,
dorsal
|
aadat
|
|
laevis
|
NF stage 33 and 34
|
otic vesicle
,
forebrain
,
roof plate
,
pronephric duct
,
pharyngeal arch
,
[+]
|
fst
|
|
laevis
|
NF stage 18
|
chordal neural plate
,
floor plate
|
fst
|
|
laevis
|
NF stage 33 and 34
|
otic vesicle
,
diencephalon
,
midbrain
,
hindbrain
,
spinal cord
,
[+]
|
prkca
|
|
laevis
|
NF stage 18
|
dorsal
|
prkca
|
|
laevis
|
NF stage 28
|
head region
|
dach1
|
|
laevis
|
NF stage 20
|
mesoderm
,
intermediate mesoderm
,
lateral plate mesoderm
|
dach1
|
|
laevis
|
NF stage 28
|
retina
,
midbrain
,
hindbrain
,
hyoid arch
,
pineal gland
,
[+]
|
ptpn3
|
|
laevis
|
NF stage 18
|
pre-chordal neural plate
,
chordal neural plate
,
intermediate mesoderm
,
dorsal
,
lateral plate mesoderm
|
ptpn3
|
|
laevis
|
NF stage 29 and 30
|
otic vesicle
,
forebrain
,
midbrain
,
chordal neural plate
|
olfm4
|
|
laevis
|
NF stage 20
|
cranial neural crest
|
olfm4
|
|
laevis
|
NF stage 28
|
mandibular arch
,
hyoid arch
,
proctodeum
|
csnk2a1
|
|
laevis
|
NF stage 18
|
pre-chordal neural plate
,
chordal neural plate
|
csnk2a1
|
|
laevis
|
NF stage 29 and 30
|
otic vesicle
,
brain
,
forebrain
,
midbrain
,
hindbrain
,
[+]
|
prkd1
|
|
laevis
|
NF stage 20
|
mesoderm
,
intermediate mesoderm
,
lateral plate mesoderm
,
cranial neural crest
|
prkd1
|
|
laevis
|
NF stage 29 and 30
|
otic vesicle
,
roof plate
,
head region
,
pronephric duct
,
pharyngeal arch
,
[+]
|
lrrn1
|
|
laevis
|
NF stage 18
|
pre-chordal neural plate
,
chordal neural plate
,
cranial neural crest
,
optic field
|
lrrn1
|
|
laevis
|
NF stage 28
|
otic vesicle
,
forebrain
,
hindbrain
,
roof plate
,
cardinal vein
,
[+]
|
wnt11
|
|
laevis
|
NF stage 20
|
pre-chordal neural plate
,
chordal neural plate
,
neural crest
,
trunk neural crest
|
wnt11
|
|
laevis
|
NF stage 28
|
otic vesicle
,
midbrain
,
hindbrain
,
spinal cord
,
heart
,
[+]
|
spdl1
|
|
laevis
|
NF stage 18
|
chordal neural plate
,
trigeminal placode
|
spdl1
|
|
laevis
|
NF stage 29 and 30
|
otic vesicle
,
forebrain
,
midbrain
,
hindbrain
,
spinal cord
,
[+]
|
|
|
Fig. 7. Expression patterns of Xenopus orthologues to human genes with multiple BREs. Of the 26 representative orthologues from the 80 genes with available annotation in Xenopus, the expression patterns of 19 genes were analyzed by whole mount in situ hybridization. Expression patterns are organized based on the behavior of each gene in the RT-PCR experiments shown in Table 1 (strong, weak, no change, no data, not examined). Not shown are Id3 (Fig. 3) and BMP2 (Nishimatsu et al., 1992). Shown are the patterns at the neurula and tailbud stages for each gene; refer to Table 1 for a description of each pattern at the gastrula stage. Unless otherwise indicated, for neurula stages, anterior is to the left and dorsal is up. For tailbud stages, lateral views are shown. |