Search Criteria |
Gene/Clone | Species | Stage | Anatomy Item | Experimenter |
---|---|---|---|---|
shh | xenopus | embryonic structure |
Too many results?Too few results?
Expression summary for shh
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Experiment | Species | Images | Stages | Anatomy | Assay |
Harland lab in situ screen Assay
Harland Lab |
tropicalis |
1 image |
NF stage 20 | axial mesoderm | in situ hybridization |
López SL et al. (2003) Assay
Paper |
laevis |
2 images |
NF stage 10.25 to NF stage 15 | axial mesoderm, blastopore, blastopore lip, marginal zone, upper blastopore lip | in situ hybridization |
Offner N et al. (2005) Assay
Paper |
laevis |
1 image |
NF stage 16 to NF stage 18 | neural tube, prechordal plate | in situ hybridization |
Lupo G et al. (2005) Assay
Paper |
xenopus |
1 image |
NF stage 18 to NF stage 33 and 34 | cement gland primordium, liver diverticulum | in situ hybridization |
Silva AC et al. (2003) Assay
Paper |
laevis |
1 image |
NF stage 22 to NF stage 24 | neural tube | in situ hybridization |
Inomata H et al. (2008) Assay
Paper |
laevis |
2 images |
NF stage 13 | axial mesoderm | in situ hybridization |
The secreted serine protease xHtrA1 stimulates long-range FGF signaling in the early Xenopus embryo.
Paper |
laevis |
1 image |
NF stage 14 | axial mesoderm | in situ hybridization |
The presumptive floor plate (notoplate) induces behaviors associated with convergent extension in medial but not lateral neur...
Paper |
laevis |
1 image |
NF stage 11 to NF stage 13 | blastopore lip | in situ hybridization |
Cholesterol homeostasis in development: the role of Xenopus 7-dehydrocholesterol reductase (Xdhcr7) in neural development.
Paper |
laevis |
1 image |
NF stage 14 to NF stage 33 and 34 | epibranchial placode, neural tube, prechordal plate | in situ hybridization |
Negative regulation of Hedgehog signaling by the cholesterogenic enzyme 7-dehydrocholesterol reductase.
Paper |
xenopus |
1 image |
NF stage 10 to NF stage 35 and 36 | dorsal marginal zone, liver diverticulum, otic placode, upper blastopore lip | in situ hybridization |
Olfactory and lens placode formation is controlled by the hedgehog-interacting protein (Xhip) in Xenopus.
Paper |
laevis |
1 image |
NF stage 32 | liver primordium, visceral pouch | in situ hybridization |
Neural tube closure requires Dishevelled-dependent convergent extension of the midline.
Paper |
laevis |
1 image |
NF stage 21 | axial mesoderm | in situ hybridization |
Distinct expression of two types of Xenopus Patched genes during early embryogenesis and hindlimb development.
Paper |
laevis |
1 image |
NF stage 26 to NF stage 31 | prechordal plate | in situ hybridization |
R-Spondin2 is a secreted activator of Wnt/beta-catenin signaling and is required for Xenopus myogenesis.
Paper |
laevis |
1 image |
NF stage 50 | neural tube | in situ hybridization |
Xenbase User Curated Experiment
European Xenopus Resource Centre (EXRC) |
tropicalis |
1 image |
NF stage 32 | foregut, gall bladder primordium | in situ hybridization |
Xenbase User Curated Experiment
European Xenopus Resource Centre (EXRC) |
tropicalis |
1 image |
NF stage 11 | blastopore lip, dorsal marginal zone, upper blastopore lip | in situ hybridization |
Xenopus sonic hedgehog guides retinal axons along the optic tract.
Paper |
laevis |
1 image |
NF stage 32 to NF stage 37 and 38 | neural tube | in situ hybridization |
The role of Xenopus dickkopf1 in prechordal plate specification and neural patterning.
Paper |
laevis |
1 image |
NF stage 13 | axial mesoderm | in situ hybridization |
The Alzheimer-related gene presenilin-1 facilitates sonic hedgehog expression in Xenopus primary neurogenesis.
Paper |
laevis |
1 image |
NF stage 13 to NF stage 14 | neural tube | in situ hybridization |
Suzuki M et al. (2010) Assay
Paper |
laevis |
1 image |
NF stage 15 to NF stage 16 | neural tube | in situ hybridization |
Takabatake T et al. (2000) Assay
Paper |
laevis |
2 images |
NF stage 27 to NF stage 35 and 36 | axial mesoderm, foregut, gall bladder primordium | in situ hybridization |
Transmembrane voltage potential controls embryonic eye patterning in Xenopus laevis.
Paper |
laevis |
1 image |
NF stage 29 and 30 | liver diverticulum | in situ hybridization |
Identification of novel genes affecting mesoderm formation and morphogenesis through an enhanced large scale functional scre...
Paper |
tropicalis |
1 image |
NF stage 13 to NF stage 28 | axial mesoderm, dorsal marginal zone, prechordal plate, upper blastopore lip | in situ hybridization |
Tet3 CXXC Domain and Dioxygenase Activity Cooperatively Regulate Key Genes for Xenopus Eye and Neural Development.
Paper |
laevis |
1 image |
NF stage 14 | neural tube | in situ hybridization |
Rankin SA et al. (2012) Assay
Paper |
laevis |
2 images |
NF stage 33 and 34 to NF stage 35 and 36 | foregut, gall bladder primordium | in situ hybridization |
Beck CW and Slack JM (1998) Assay
Paper |
laevis |
1 image |
NF stage 32 | neural tube | in situ hybridization |
Distinct expression and shared activities of members of the hedgehog gene family of Xenopus laevis.
Paper |
laevis |
1 image |
NF stage 10 to NF stage 20 | anterior neural tube, axial mesoderm, marginal zone, neural tube | in situ hybridization |
Scaling of dorsal-ventral patterning by embryo size-dependent degradation of Spemann''s organizer signals.
Paper |
laevis |
1 image |
NF stage 12 | presumptive axial mesoderm | in situ hybridization |
Scaling of dorsal-ventral patterning by embryo size-dependent degradation of Spemann''s organizer signals.
Paper |
laevis |
1 image |
NF stage 12 | presumptive axial mesoderm | in situ hybridization |
Sulf1 influences the Shh morphogen gradient during the dorsal ventral patterning of the neural tube in Xenopus tropicalis.
Paper |
tropicalis |
1 image |
NF stage 23 to NF stage 35 and 36 | neural tube | immunohistochemistry |
Sulf1 influences the Shh morphogen gradient during the dorsal ventral patterning of the neural tube in Xenopus tropicalis.
Paper |
tropicalis |
1 image |
NF stage 23 to NF stage 35 and 36 | dorsal pancreatic bud, foregut | in situ hybridization |
Rankin SA et al. (2014) Assay
Paper |
laevis |
1 image |
NF stage 32 to NF stage 49 | foregut, liver diverticulum, liver primordium | in situ hybridization |
Patient Lab |
laevis |
21 images |
NF stage 10.5 to NF stage 40 | axial mesoderm, cement gland primordium, dorsal marginal zone, foregut, gall bladder primordium, [+] | in situ hybridization |
Koide T et al. (2006) Assay
Paper |
laevis |
1 image |
NF stage 22 to NF stage 44 | foregut endoderm, neural tube | in situ hybridization |
Branford WW and Yost HJ (2002) Assay
Paper |
laevis |
1 image |
NF stage 26 to NF stage 27 | axial mesoderm | in situ hybridization |
Peyrot SM et al. (2011) Assay
Paper |
laevis |
3 images |
NF stage 10.5 to NF stage 35 and 36 | dorsal marginal zone, involuting marginal zone, neural tube, upper blastopore lip | in situ hybridization |
G protein-coupled receptors Flop1 and Flop2 inhibit Wnt/β-catenin signaling and are essential for head formation in Xenopus.
Paper |
laevis |
1 image |
NF stage 17 to NF stage 18 | axial mesoderm | in situ hybridization |
Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing.
Paper |
tropicalis |
1 image |
NF stage 10.5 | dorsal marginal zone | in situ hybridization |
TAK1 promotes BMP4/Smad1 signaling via inhibition of erk MAPK: a new link in the FGF/BMP regulatory network.
Paper |
laevis |
1 image |
NF stage 10 to NF stage 10.25 | dorsal marginal zone, involuting marginal zone, marginal zone, upper blastopore lip | in situ hybridization |
A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification.
Paper |
laevis |
2 images |
NF stage 23 to NF stage 35 and 36 | foregut, gall bladder primordium, neural tube | in situ hybridization |
FoxA4 favours notochord formation by inhibiting contiguous mesodermal fates and restricts anterior neural development in Xen...
Paper |
laevis |
1 image |
NF stage 15 to NF stage 28 | axial mesoderm, prechordal plate | in situ hybridization |
Pitcairn E et al. (2017) Assay
Paper |
laevis |
1 image |
NF stage 10.5 | upper blastopore lip | in situ hybridization |
Prager A et al. (2017) Assay
Paper |
laevis |
1 image |
NF stage 20 | axial mesoderm, neural tube | in situ hybridization |
Evolutionarily conserved Tbx5-Wnt2/2b pathway orchestrates cardiopulmonary development.
Paper |
laevis |
2 images |
NF stage 35 and 36 | foregut, foregut endoderm, gall bladder primordium | in situ hybridization |
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