Expression summary for shh

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Experiment	Species	Images	Stages	Anatomy	Assay
Harland lab in situ screen Assay Harland Lab	tropicalis	1 image	NF stage 20	neural groove, neural plate, notochord	in situ hybridization
Khokha MK et al. (2005) Assay Paper	tropicalis	2 images	NF stage 14 to NF stage 15	notochord	in situ hybridization
López SL et al. (2003) Assay Paper	xenopus	1 image	NF stage 10.25 to NF stage 15	notochord	in situ hybridization
López SL et al. (2003) Assay Paper	laevis	2 images	NF stage 10.25 to NF stage 15	chordal neural plate, mesoderm, neural groove, notochord, pre-chordal neural plate	in situ hybridization
Nguyen V et al. (2005) Assay Paper	laevis	1 image	NF stage 14	neural groove, neural plate, neuroectoderm	in situ hybridization
Ishizuya-Oka A and Shi YB (2009) Assay Paper	laevis	1 image	NF stage 60 to NF stage 61	gut epithelium	in situ hybridization
Offner N et al. (2005) Assay Paper	xenopus	1 image	NF stage 15	notochord	in situ hybridization
Lupo G et al. (2005) Assay Paper	xenopus	2 images	neurula stage to NF stage 18	neural groove, notochord	in situ hybridization
Silva AC et al. (2003) Assay Paper	laevis	1 image	NF stage 22 to NF stage 24	notochord	in situ hybridization
Howell M et al. (2002) Assay Paper	xenopus	1 image	NF stage 35 and 36	notochord	in situ hybridization
Inomata H et al. (2008) Assay Paper	laevis	2 images	NF stage 13	neural groove, pre-chordal neural plate	in situ hybridization
Hasebe T et al. (2008) Assay Paper	laevis	1 image	NF stage 61 to NF stage 66	epithelium	in situ hybridization
Paper	laevis	1 image	NF stage 14 to NF stage 28	neural plate, notochord, notoplate, pre-chordal neural plate	in situ hybridization
The secreted serine protease xHtrA1 stimulates long-range FGF signaling in the early Xenopus embryo. Paper	laevis	1 image	NF stage 14	neural groove	in situ hybridization
The presumptive floor plate (notoplate) induces behaviors associated with convergent extension in medial but not lateral neur... Paper	laevis	1 image	NF stage 11 to NF stage 13	notochord, notoplate	in situ hybridization
Cholesterol homeostasis in development: the role of Xenopus 7-dehydrocholesterol reductase (Xdhcr7) in neural development. Paper	laevis	1 image	NF stage 14 to NF stage 33 and 34	hypochord, neural groove, notochord	in situ hybridization
Negative regulation of Hedgehog signaling by the cholesterogenic enzyme 7-dehydrocholesterol reductase. Paper	xenopus	1 image	NF stage 10 to NF stage 35 and 36	endoderm, notochord	in situ hybridization
Olfactory and lens placode formation is controlled by the hedgehog-interacting protein (Xhip) in Xenopus. Paper	laevis	1 image	NF stage 17 to NF stage 32	epithelium, mesoderm, neural groove, neural plate, neuroectoderm, [+] notochord, notoplate, pre-chordal neural plate	in situ hybridization
Neural tube closure requires Dishevelled-dependent convergent extension of the midline. Paper	laevis	1 image	NF stage 21	neural groove, neural plate	in situ hybridization
Distinct expression of two types of Xenopus Patched genes during early embryogenesis and hindlimb development. Paper	laevis	1 image	NF stage 14 to NF stage 31	neural groove, neural plate, notochord	in situ hybridization
Distinct expression of two types of Xenopus Patched genes during early embryogenesis and hindlimb development. Paper	laevis	1 image	NF stage 52	mesenchyme	in situ hybridization
Neuroectodermal specification and regionalization of the Spemann organizer in Xenopus. Paper	xenopus	1 image	NF stage 10 to NF stage 12.5	notochord	in situ hybridization
R-Spondin2 is a secreted activator of Wnt/beta-catenin signaling and is required for Xenopus myogenesis. Paper	laevis	1 image	NF stage 50	zona limitans intrathalamica	in situ hybridization
Xenbase User Curated Experiment European Xenopus Resource Centre (EXRC)	tropicalis	1 image	NF stage 32	notochord	in situ hybridization
Xenbase User Curated Experiment European Xenopus Resource Centre (EXRC)	tropicalis	1 image	NF stage 11	mesoderm	in situ hybridization
Expression of components of Wnt and Hedgehog pathways in different tissue layers during lung development in Xenopus laevis. Paper	laevis	1 image	NF stage 41	epithelium	in situ hybridization
Xenopus sonic hedgehog guides retinal axons along the optic tract. Paper	laevis	1 image	NF stage 32 to NF stage 37 and 38	notochord, optic stalk	in situ hybridization
A novel function for Hedgehog signalling in retinal pigment epithelium differentiation. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 42	retinal ganglion cell layer, retinal outer nuclear layer, retinal pigmented epithelium	in situ hybridization
The role of Xenopus dickkopf1 in prechordal plate specification and neural patterning. Paper	laevis	1 image	NF stage 13	neural groove, notochord, pre-chordal neural plate	in situ hybridization
The Alzheimer-related gene presenilin-1 facilitates sonic hedgehog expression in Xenopus primary neurogenesis. Paper	laevis	1 image	NF stage 13 to NF stage 14	neural groove, neural plate, notochord	in situ hybridization
Anteroposterior axis formation in Xenopus limb bud recombinants: a model of pattern formation during limb regeneration. Paper	laevis	1 image	NF stage 55 to NF stage 56	blastema, distal mesenchyme	in situ hybridization
Anteroposterior axis formation in Xenopus limb bud recombinants: a model of pattern formation during limb regeneration. Paper	laevis	1 image	NF stage 54 to NF stage 56	blastema, mesenchyme	in situ hybridization
Shh expression in developing and regenerating limb buds of Xenopus laevis. Paper	laevis	1 image	NF stage 50 to NF stage 55	epidermis inner layer	in situ hybridization
Shh expression in developing and regenerating limb buds of Xenopus laevis. Paper	laevis	1 image	NF stage 53 to NF stage 55	blastema, epidermis inner layer, regenerating hindlimb	in situ hybridization
Suzuki M et al. (2010) Assay Paper	laevis	1 image	NF stage 15 to NF stage 16	neural groove, neural plate, neuroectoderm	in situ hybridization
Takabatake T et al. (2000) Assay Paper	laevis	2 images	NF stage 27 to NF stage 35 and 36	endoderm, notochord	in situ hybridization
Shh expression in developing and regenerating limb buds of Xenopus laevis. Paper	laevis	1 image	NF stage 50	epidermis inner layer	in situ hybridization
Transmembrane voltage potential controls embryonic eye patterning in Xenopus laevis. Paper	laevis	1 image	NF stage 18 to NF stage 29 and 30	chordoneural hinge, neural groove, otic vesicle	in situ hybridization
Identification of novel genes affecting mesoderm formation and morphogenesis through an enhanced large scale functional scre... Paper	tropicalis	1 image	NF stage 13 to NF stage 28	involuted dorsal mesoderm, notochord	in situ hybridization
Rankin SA et al. (2012) Assay Paper	laevis	2 images	NF stage 33 and 34 to NF stage 35 and 36	endoderm, notochord	in situ hybridization
Beck CW and Slack JM (1998) Assay Paper	laevis	1 image	NF stage 32	chordoneural hinge, hypochord, notochord	in situ hybridization
Distinct expression and shared activities of members of the hedgehog gene family of Xenopus laevis. Paper	laevis	1 image	NF stage 19 to NF stage 29 and 30	notochord	in situ hybridization
Multiple stage-dependent roles for histone deacetylases during amphibian embryogenesis: implications for the involvement of ... Paper	laevis	1 image	NF stage 33 and 34 to NF stage 35 and 36	notochord	in situ hybridization
Scaling of dorsal-ventral patterning by embryo size-dependent degradation of Spemann''s organizer signals. Paper	laevis	1 image	NF stage 12.5	notochord	in situ hybridization
Scaling of dorsal-ventral patterning by embryo size-dependent degradation of Spemann''s organizer signals. Paper	laevis	1 image	NF stage 13	notochord	in situ hybridization
Sulf1 influences the Shh morphogen gradient during the dorsal ventral patterning of the neural tube in Xenopus tropicalis. Paper	tropicalis	1 image	NF stage 15 to NF stage 35 and 36	notochord	immunohistochemistry
Sulf1 influences the Shh morphogen gradient during the dorsal ventral patterning of the neural tube in Xenopus tropicalis. Paper	tropicalis	1 image	NF stage 15 to NF stage 35 and 36	anterior ventral blood island, notochord	in situ hybridization
Rankin SA et al. (2014) Assay Paper	laevis	1 image	NF stage 32 to NF stage 49	endoderm, notochord	in situ hybridization
The cytoskeletal protein Zyxin inhibits Shh signaling during the CNS patterning in Xenopus laevis through interaction with t... Paper	laevis	1 image	NF stage 15 to NF stage 27	hypochord, notochord	in situ hybridization
Stolow MA and Shi YB (1995) Assay Paper	laevis	1 image	NF stage 32	notochord	in situ hybridization

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