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Gene/Clone	Species	Stage	Anatomy Item	Experimenter
sox9	xenopus		embryonic structure

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Expression summary for sox9

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Experiment	Species	Images	Stages	Anatomy	Assay
Saint-Germain N et al. (2004) Assay Paper	xenopus	1 image	NF stage 22 to NF stage 44	optic vesicle, otic placode	in situ hybridization
Rogers CD et al. (2009) Assay Paper	laevis	1 image	NF stage 23	otic placode	in situ hybridization
O'Donnell M et al. (2006) Assay Paper	laevis	1 image	NF stage 25 to NF stage 35 and 36	dorsal pancreatic bud, optic vesicle, otic placode	in situ hybridization
Abu-Elmagd M et al. (2009) Assay Paper	laevis	1 image	NF stage 18	eye primordium	in situ hybridization
Light W et al. (2005) Assay Paper	xenopus	1 image	NF stage 28	optic vesicle	in situ hybridization
Spokony RF et al. (2002) Assay Paper	laevis	1 image	NF stage 10.5 to NF stage 32	blastopore, optic vesicle, otic placode	in situ hybridization
Harland Lab Assay Harland Lab	tropicalis	1 image	NF stage 33 and 34	lens placode	in situ hybridization
Paper	laevis	1 image	NF stage 22 to NF stage 24	prechordal plate	in situ hybridization
Paper	laevis	1 image	NF stage 39 to NF stage 45	endocardial tube	in situ hybridization
Paper	laevis	1 image	NF stage 15 to NF stage 40	epibranchial placode, eye primordium, lateral line placode, olfactory placode, optic vesicle, [+] otic placode	in situ hybridization
The small GTPase RhoV is an essential regulator of neural crest induction in Xenopus. Paper	laevis	1 image	NF stage 13 to NF stage 21	otic placode	in situ hybridization
The small GTPase RhoV is an essential regulator of neural crest induction in Xenopus. Paper	laevis	1 image	NF stage 13 to NF stage 21	otic placode	in situ hybridization
Specification of the otic placode depends on Sox9 function in Xenopus. Paper	xenopus	1 image	NF stage 23	otic placode	in situ hybridization
Serotonin 2B receptor signaling is required for craniofacial morphogenesis and jaw joint formation in Xenopus. Paper	laevis	1 image	NF stage 26	cranial placode, otic placode	in situ hybridization
Paraxial T-box genes, Tbx6 and Tbx1, are required for cranial chondrogenesis and myogenesis. Paper	laevis	1 image	NF stage 25 to NF stage 27	epibranchial placode, otic placode	in situ hybridization
Paraxial T-box genes, Tbx6 and Tbx1, are required for cranial chondrogenesis and myogenesis. Paper	laevis	1 image	NF stage 27	epibranchial placode, optic vesicle	in situ hybridization
Paraxial T-box genes, Tbx6 and Tbx1, are required for cranial chondrogenesis and myogenesis. Paper	xenopus	1 image	NF stage 27	lens placode, olfactory placode	in situ hybridization
Hairy2-Id3 interactions play an essential role in Xenopus neural crest progenitor specification. Paper	laevis	1 image	NF stage 28	lateral plate mesoderm	in situ hybridization
Differential distribution of competence for panplacodal and neural crest induction to non-neural and neural ectoderm. Paper	laevis	1 image	NF stage 18	epibranchial placode	in situ hybridization
Functional analysis of Sox8 during neural crest development in Xenopus. Paper	laevis	1 image	NF stage 24	otic placode	in situ hybridization
Sox9, a novel pancreatic marker in Xenopus. Paper	laevis	1 image	NF stage 25 to NF stage 40	dorsal pancreatic bud	in situ hybridization
Sox9, a novel pancreatic marker in Xenopus. Paper	laevis	1 image	NF stage 31 to NF stage 40	dorsal pancreatic bud	in situ hybridization
Rankin SA et al. (2014) Assay Paper	laevis	1 image	NF stage 42 to NF stage 59	foregut	in situ hybridization
Griffin JN et al. (2015) Assay Paper	tropicalis	1 image	NF stage 28	optic vesicle	in situ hybridization
Macrì S et al. (2016) Assay Paper	laevis	1 image	NF stage 28	optic vesicle	in situ hybridization
Sox9 function in craniofacial development and disease. Paper	laevis	2 images	NF stage 17 to NF stage 18	otic placode	in situ hybridization
Pa2G4 is a novel Six1 co-factor that is required for neural crest and otic development. Paper	laevis	1 image	NF stage 23	cranial placode, otic placode	in situ hybridization
Timing is everything: Reiterative Wnt, BMP and RA signaling regulate developmental competence during endoderm organogenesis. Paper	laevis	1 image	NF stage 37 and 38	dorsal pancreatic bud	in situ hybridization
PFKFB4 control of AKT signaling is essential for premigratory and migratory neural crest formation. Paper	laevis	1 image	NF stage 26	optic vesicle, otic placode	in situ hybridization
Six1 proteins with human branchio-oto-renal mutations differentially affect cranial gene expression and otic development. Paper	laevis	2 images	NF stage 16 to NF stage 18	otic placode	in situ hybridization
Sullivan CH et al. (2019) Assay Paper	laevis	1 image	NF stage 16 to NF stage 18	otic placode	in situ hybridization
Mcrs1 interacts with Six1 to influence early craniofacial and otic development. Paper	laevis	1 image	NF stage 13 to NF stage 18	otic placode	in situ hybridization

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