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Gene/Clone	Species	Stage	Anatomy Item	Experimenter
ventx2.1	xenopus		whole organism [+] anatomical group,cell,embryonic structure,acellular anatomical structure,anatomical region,anatomical space,extraembryonic structure,process,cell condensation,cell part,multicellular anatomical structure

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Expression summary for ventx2

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Experiment	Species	Images	Stages	Anatomy	Assay
XDB3 Assay XDB3	laevis	1 image	NF stage 20	endoderm, optic vesicle, posterior neural tube	in situ hybridization
AxelDB CNRS UMR 8080	laevis	3 images	NF stage 10.5 to NF stage 29 and 30	circumblastoporal collar, dorsal tail fin, endoderm, epidermis, eye, [+] lung primordium, mesoderm, non-neural ectoderm, optic field, otic vesicle, pharyngeal arch, proctodeum, roof plate, somite, tail bud, tail tip, ventral tail fin, ventro-lateral marginal zone	in situ hybridization
Harland Lab Assay Harland Lab	tropicalis	6 images	NF stage 18 to NF stage 37 and 38	anterior endoderm, anterior neural tube, brain, cement gland, cement gland primordium, [+] endoderm, endomesoderm, eye, eye primordium, fin, foregut endoderm, head, hindgut endoderm, lateral plate mesoderm, lung bud, lung primordium, mesoderm, neural tube, neuroectoderm, optic vesicle, otic vesicle, pharyngeal arch, post-anal gut, posterior endoderm, posterior neural tube, tail bud, tail tip	in situ hybridization
XBP1 forms a regulatory loop with BMP-4 and suppresses mesodermal and neural differentiation in Xenopus embryos. Paper	laevis	1 image	NF stage 10.5	dorso-lateral marginal zone, marginal zone, ventral marginal zone, ventro-lateral marginal zone	in situ hybridization
HNF1(beta) is required for mesoderm induction in the Xenopus embryo. Paper	xenopus	1 image	NF stage 10.25	ectoderm, mesoderm	in situ hybridization
Xenopus brain factor-2 controls mesoderm, forebrain and neural crest development. Paper	laevis	1 image	NF stage 10.5 to NF stage 11.5	dorso-lateral marginal zone, marginal zone, ventral marginal zone, ventro-lateral marginal zone	in situ hybridization
Transcriptional regulation of Xvent homeobox genes. Paper	laevis	2 images	NF stage 10.5 to NF stage 35 and 36	circumblastoporal collar, cloaca, dorsal fin, dorso-lateral marginal zone, eye, [+] forebrain, lung, marginal zone, otic vesicle, periocular region, pharyngeal arch, tail bud, tail region, ventral marginal zone, ventro-lateral marginal zone	in situ hybridization
A Xenopus gene, Xbr-1, defines a novel class of homeobox genes and is expressed in the dorsal ciliary margin of the eye. Paper	laevis	1 image	NF stage 10.5 to NF stage 33 and 34	ectoderm, eye, lung primordium, marginal zone, optic field, [+] pharynx, tail bud, tail tip, ventral marginal zone	in situ hybridization
A Xenopus gene, Xbr-1, defines a novel class of homeobox genes and is expressed in the dorsal ciliary margin of the eye. Paper	laevis	1 image	NF stage 25 to NF stage 33 and 34	ciliary marginal zone, eye, lateral plate mesoderm, neural tube	in situ hybridization
Regulation of dorsal-ventral patterning: the ventralizing effects of the novel Xenopus homeobox gene Vox. Paper	laevis	1 image	NF stage 11 to NF stage 12	ectoderm, involuted ventral mesoderm, neuroectoderm	in situ hybridization
Smad7 inhibits mesoderm formation and promotes neural cell fate in Xenopus embryos. Paper	laevis	1 image	NF stage 10	ventral marginal zone, ventro-lateral marginal zone	in situ hybridization
Henningfeld KA et al. (2002) Assay Paper	laevis	1 image	NF stage 11.5	circumblastoporal collar, mesoderm	in situ hybridization
Gawantka V et al. (1998) Assay Paper	laevis	2 images	NF stage 29 and 30	eye, pharyngeal region, posterior wall of neurenteric canal, tail bud	in situ hybridization
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula trans... Paper	laevis	1 image	NF stage 11	ventral marginal zone	in situ hybridization
Lineage commitment of embryonic cells involves MEK1-dependent clearance of pluripotency regulator Ventx2. Paper	laevis	1 image	NF stage 13	non-neural ectoderm	in situ hybridization
Lineage commitment of embryonic cells involves MEK1-dependent clearance of pluripotency regulator Ventx2. Paper	laevis	1 image	NF stage 13	non-neural ectoderm	in situ hybridization
Genomic integration of Wnt/β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs. Paper	laevis	1 image	NF stage 20	circumblastoporal collar, endoderm, hindgut, mesoderm	in situ hybridization
Genomic integration of Wnt/β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs. Paper	laevis	1 image	NF stage 20	circumblastoporal collar, endoderm, hindgut, mesoderm	in situ hybridization
Lineage commitment of embryonic cells involves MEK1-dependent clearance of pluripotency regulator Ventx2. Paper	laevis	1 image	NF stage 10.5 to NF stage 13	dorso-lateral marginal zone, mesoderm, non-neural ectoderm, ventral marginal zone	in situ hybridization
Green YS et al. (2016) Assay Paper	laevis	1 image	NF stage 11	ventro-lateral marginal zone	in situ hybridization
Notch1 is asymmetrically distributed from the beginning of embryogenesis and controls the ventral center. Paper	laevis	1 image	NF stage 9 to NF stage 10	dorso-lateral marginal zone, ventral marginal zone, ventro-lateral marginal zone	in situ hybridization
Candidate Heterotaxy Gene FGFR4 Is Essential for Patterning of the Left-Right Organizer in Xenopus. Paper	tropicalis	1 image	NF stage 10	mesoderm	in situ hybridization
The regulatory proteins DSCR6 and Ezh2 oppositely regulate Stat3 transcriptional activity in mesoderm patterning during Xeno... Paper	laevis	1 image	NF stage 10 to NF stage 10.5	ventro-lateral marginal zone	in situ hybridization
Wellcome CRC pCS107 tropicalis St10-12 Unigene tropicalis cDNA library Xenopus IMAGE cDNA Library	tropicalis		NF stage 10 to NF stage 12	whole organism	cDNA Library
XGC-gastrula Unigene tropicalis cDNA library	tropicalis		NF stage 10.5 to NF stage 12	whole organism	cDNA Library
XGC-neurula Unigene tropicalis cDNA library	tropicalis		NF stage 13 to NF stage 21	whole organism	cDNA Library
NICHD_XGC_Emb5 Unigene tropicalis cDNA library Xenopus IMAGE cDNA Library	tropicalis		NF stage 10 to NF stage 13	whole organism	cDNA Library
NICHD_XGC_Emb6 Unigene tropicalis cDNA library Xenopus IMAGE cDNA Library	tropicalis		NF stage 14 to NF stage 19	whole organism	cDNA Library
NICHD_XGC_Emb7 Unigene tropicalis cDNA library Xenopus IMAGE cDNA Library	tropicalis		NF stage 20 to NF stage 27	whole organism	cDNA Library
XtSt10-30 Unigene tropicalis cDNA library Xenopus IMAGE cDNA Library	tropicalis		NF stage 10 to NF stage 29 and 30	whole organism	cDNA Library
XGC-tailbud Unigene tropicalis cDNA library	tropicalis		NF stage 28 to NF stage 29 and 30	whole organism	cDNA Library
NIH_XGC_tropGas7 Unigene tropicalis cDNA library Xenopus IMAGE cDNA Library	tropicalis		NF stage 10.5 to NF stage 12.5	whole organism	cDNA Library
NIH_XGC_tropGas6 Unigene tropicalis cDNA library Xenopus IMAGE cDNA Library	tropicalis		NF stage 10 to NF stage 13	whole organism	cDNA Library
Xenopus tropicalis embryo gastrula Unigene tropicalis cDNA library	tropicalis		NF stage 10 to NF stage 12.5	whole organism	cDNA Library
normalized Xenopus laevis gastrula Unigene laevis cDNA library	laevis		NF stage 10.5 to NF stage 11.5	whole organism	cDNA Library
Xenla 13LiCl Unigene laevis cDNA library	laevis		NF stage 13	whole organism	cDNA Library
Blackshear/Soares normalized Xenopus egg library Unigene laevis cDNA library	laevis		unfertilized egg stage	egg	cDNA Library
Wellcome CRC pSK animal cap Unigene laevis cDNA library Xenopus IMAGE cDNA Library	laevis		NF stage 7 to NF stage 9	animal cap	cDNA Library
NICHD_XGC_Emb1 Unigene laevis cDNA library Xenopus IMAGE cDNA Library	laevis		NF stage 10	whole organism	cDNA Library
Xenopus laevis gastrula non normalized Unigene laevis cDNA library Xenopus IMAGE cDNA Library	laevis		NF stage 10.5 to NF stage 11.5	whole organism	cDNA Library
Wellcome CRC pRN3 St13 17 egg animal cap Unigene laevis cDNA library Xenopus IMAGE cDNA Library	laevis		NF stage 13 to NF stage 21	whole organism	cDNA Library
Wellcome CRC pcDNAI egg Unigene laevis cDNA library Xenopus IMAGE cDNA Library	laevis		unfertilized egg stage	egg	cDNA Library
Kirschner embryo St10 14 Unigene laevis cDNA library Xenopus IMAGE cDNA Library	laevis		NF stage 10 to NF stage 14	whole organism	cDNA Library
NICHD_XGC_Emb4 Unigene laevis cDNA library Xenopus IMAGE cDNA Library	laevis		NF stage 31 to NF stage 32	whole organism	cDNA Library
Stage 10+ Gastrula Library Unigene laevis cDNA library	laevis		NF stage 10 to NF stage 10.5	whole organism	cDNA Library
NIBB Mochii normalized Xenopus neurula library Unigene laevis cDNA library	laevis		NF stage 15	whole organism	cDNA Library
NIBB Mochii normalized Xenopus tailbud library Unigene laevis cDNA library	laevis		NF stage 25	whole organism	cDNA Library
NIBB Mochii normalized Xenopus early gastrula library Unigene laevis cDNA library	laevis		NF stage 10.5	whole organism	cDNA Library
Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library Unigene laevis cDNA library	laevis		NF stage 12.5	ectoderm	cDNA Library
NICHD_XGC_Emb9 Unigene laevis cDNA library Xenopus IMAGE cDNA Library	laevis		NF stage 17 to NF stage 19	whole organism	cDNA Library

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