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Gene/Clone	Species	Stage	Anatomy Item	Experimenter
cdx4	xenopus		mesoderm [+] head mesoderm,presomitic mesoderm,somite,intermediate mesoderm,dermatome,myocoelic slit,paraxial mesoderm,somatic layer of lateral plate mesoderm,splanchnic layer of lateral plate mesoderm,lateral plate mesoderm,myotome,external carotid artery,sclerotome,sclerotomal cartilage,sclerotomal mesenchyme,filter chamber,abdominal myoblast,anterior dorsal lateral plate region,hematopoietic stem cell,mesodermal cell,presumptive paraxial mesoderm,ventral mesoderm,dorsal lateral plate mesoderm,rostral presomitic mesoderm,caudal presomitic mesoderm,migrating macrophage,dorsomedial edge of myotome,ventrolateral edge of myotome,dermomyotome,syndetome,Eberth-Kastschenko layer,M band,abdominal myoblast,anterior dorsal lateral plate region,anterior notochord,anterior palatine artery,anterior ventral blood island,atrial septum,atrioventricular canal,atrioventricular canal endocardium,atrioventricular valve,atrioventricular valve leaflet,axial ossicle,cardiac atrium,cardiac jelly,cardiac myocyte,cardiac progenitor cell,cardiac valve,cardiac ventricle,caudal presomitic mesoderm,cerebral artery,chordoneural hinge,cloaca,cloacal sphincter,cranial skeleton,dermatome,dermomyotome,distal tubule,dorsal fin vasculature,dorsal lateral plate mesoderm,dorsomedial edge of myotome,early distal tubule,early proximal tubule,endocardial cushion,endocardial tube,endocardium,endothelial cell,enteric neuron,epicardial precursor cell,epicardium,external carotid artery,filter chamber,flexural organ,gamete,glomeral nexus,glomerular epithelial cell,glomerular mesangial cell,glomerulus,glomus,hematopoietic stem cell,involuted dorsal mesoderm,involuted ventral mesoderm,late distal tubule,late proximal tubule,left atrium,macrophage,mandibular mesenchyme,mesonephric collecting duct,mesonephric tubule,migrating macrophage,myocardium,myocoelic slit,myofibril,myotome,neurenteric canal,neutrophil,notochordal sheath,ophthalmic artery,outflow tract,pericardial muscle,pericardial roof,pericardium,perichordal tissue,podocyte,postcranial axial skeleton,posterior notochord,posterior palatine artery,posterior ventral blood island,posterior wall of neurenteric canal,prechordal plate,presomitic mesoderm,pronephric duct,pronephric nephron,pronephric nephrostome,pronephric sinus,pronephric tubule,proximal tubule,proximal tubule branch,rectal diverticulum,rib,right atrium,rostral presomitic mesoderm,sarcomere,sclerotomal cartilage,sclerotomal mesenchyme,sclerotome,sinus venosus,skeletal muscle satellite cell,skeletal myocyte,smooth muscle myocyte,somatic layer of lateral plate mesoderm,spiral septum,splanchnic layer of lateral plate mesoderm,stratum compactum,stratum spongiosum,syndetome,thrombocyte,trabecula carnea,transverse process,urostyle,vacuolated notochordal tissue,ventral blood island border,ventral fin vasculature,ventral mesoderm,ventricular outflow tract,ventrolateral edge of myotome,vertebra,vertebral centrum,vertebral column,vertebral element,Mullerian duct,adult thrombocyte,anterior cardinal vein,anterior lymph sac,anterior palatine artery,anterior ventral blood island,aortic arch,arteria iliaca communis,arteria mesenterica posterior,arteria subclavia,arterial endothelium,axial mesoderm,axial skeleton,blood,capillary system of liver,cardiac atrium,cardiac mesoderm,cardinal vein,caudal artery,caudal vein,ceratobranchial I,ceratobranchial II,ceratobranchial III,ceratobranchial IV,cerebral artery,cervical vertebra,chondroblast,chondrocyte,circumblastoporal collar,cloacal sphincter,coeliaco-mesenteric artery,coelomic epithelium,commisura quadratocranialis anterior,cornua trabecula,cranial muscle,cranial muscle primordium,dermatome,dermis,dorsal aorta,dorsal fin vasculature,dorsal lymph space,duct of Cuvier,elastica externa,endocardial tube,endocardium,epicardium,erythroid cell,external carotid artery,external gill,external jugular vein,facies hyoidis of the palatoquadrate,fin vasculature,flexural organ,gastric vein,genital ridge,genital system,gill primordium,glomeral mesenchyme,glomeral nexus,glomus,head mesoderm,head somite 1,head somite 2,head somite 3,head somite 4,heart,heart primordium,hepatic portal vein,hepatic vein,hypaxial muscle,infrarostral,intermediate mesoderm,internal carotid artery,internal jugular vein,interrenal vein,intersomitic artery,intersomitic vein,intersomitic vessel,kidney,larval aorta,lateral plate mesoderm,lateral postcardinal vein,left channel of ventral aorta,left lymph heart,left spleen primordium,lower blastopore lip,lymph vessel,m. cucullaris,m. depressor mandibulae,m. levator scapulae inferior,m. levator scapulae superior,m. petrohyoideus,medial abdominal vein,medial cardinal vein,mesenchymal stem cell,mesonephric duct,mesonephric early distal tubule,mesonephric early proximal tubule,mesonephric late distal tubule,mesonephric late proximal tubule,mesonephric mesenchyme,mesonephric nephron,mesonephric sinus,migrating macrophage,musculoabdominal vein,myeloid cell,myocardium,myotome of head somite 1,myotome of head somite 2,myotome of head somite 3,myotome of head somite 4,myotome of tail somite 14,myotome of tail somite 15,myotome of tail somite 16,myotome of tail somite 17,myotome of tail somite 18,myotome of trunk somite 1,myotome of trunk somite 10,myotome of trunk somite 11,myotome of trunk somite 12,myotome of trunk somite 13,myotome of trunk somite 2,myotome of trunk somite 3,myotome of trunk somite 4,myotome of trunk somite 5,myotome of trunk somite 6,myotome of trunk somite 7,myotome of trunk somite 8,myotome of trunk somite 9,neurenteric canal,notochord,notochordal epithelium,notochordal sheath,occipitovertebral artery,omphalomesenteric vein,oviduct,paired dorsal aorta,palatoquadrati,parachordal,paraxial mesoderm,planum hypobranchiale,planum trabeculare anticum,postcranial axial skeleton,posterior cardinal vein,posterior vena cava,posterior ventral blood island,prechordal plate,presomitic mesoderm,presumptive paraxial mesoderm,primary heart field,processus anterior hyalis,processus articularis palatoquadrati,processus ascendens palatoquadrate,processus lateralis hyalis,processus muscularis palatoquadrati,processus posterior hyalis,processus retroarticularis of Meckel's cartilage,proctodeum,proepicardium,pronephric duct,pronephric kidney,pronephric mesenchyme,pronephric nephrostome,pronephric sinus,pulmonary vein,right channel of ventral aorta,right lymph heart,right spleen primordium,sacral vertebra,sclerotomal cartilage,sclerotomal mesenchyme,sclerotome of head somite 4,sclerotome of tail somite 14,sclerotome of tail somite 15,sclerotome of tail somite 16,sclerotome of tail somite 17,sclerotome of tail somite 18,sclerotome of trunk somite 1,sclerotome of trunk somite 10,sclerotome of trunk somite 11,sclerotome of trunk somite 12,sclerotome of trunk somite 13,sclerotome of trunk somite 2,sclerotome of trunk somite 3,sclerotome of trunk somite 4,sclerotome of trunk somite 5,sclerotome of trunk somite 6,sclerotome of trunk somite 7,sclerotome of trunk somite 8,sclerotome of trunk somite 9,secondary heart field,skeletal muscle,smooth muscle,somatic layer of lateral plate mesoderm,somite,spiral septum,splanchnic layer of lateral plate mesoderm,spleen,subinterstitial vein,subocular cartilage,suprarostral plate,syndetome,tail bud,tail somite 14,tail somite 15,tail somite 16,tail somite 17,tail somite 18,tail vein,tendon,tendon fibroblast,thrombocyte,trabecula carnea,trabecula cranii,trunk somite 1,trunk somite 10,trunk somite 11,trunk somite 12,trunk somite 13,trunk somite 2,trunk somite 3,trunk somite 4,trunk somite 5,trunk somite 6,trunk somite 7,trunk somite 8,trunk somite 9,urostyle,vascular endothelium,venous endothelium,ventral aorta,ventral blood island,ventral blood island border,ventral fin vasculature,vertebral element,vitelline vein

Too many results?Too few results?

Expression summary for cdx4

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Experiment	Species	Images	Stages	Anatomy	Assay
XDB3 XDB3	laevis	1 image	NF stage 10.5	mesoderm	in situ hybridization
Shiotsugu J et al. (2004) Assay Paper	laevis	1 image	NF stage 16 to NF stage 26	tail bud	in situ hybridization
Delaune E et al. (2005) Assay Paper	laevis	1 image	NF stage 11 to NF stage 12	mesoderm	in situ hybridization
Keenan ID et al. (2006) Assay Paper	laevis	2 images	NF stage 11	circumblastoporal collar	in situ hybridization
Reece-Hoyes JS et al. (2002) Assay Paper	tropicalis	1 image	NF stage 12 to NF stage 33 and 34	circumblastoporal collar, involuted dorsal mesoderm, involuted ventral mesoderm, posterior wall of neurenteric canal, tail bud	in situ hybridization
Chen JA et al. (2005) Assay Paper	tropicalis	1 image	NF stage 29 and 30	tail bud	in situ hybridization
Analysis of the developing Xenopus tail bud reveals separate phases of gene expression during determination and outgrowth. Paper	laevis	1 image	NF stage 14 to NF stage 29 and 30	circumblastoporal collar, posterior wall of neurenteric canal	in situ hybridization
Beck CW and Slack JM (1998) Assay Paper	laevis	4 images	NF stage 13 to NF stage 29 and 30	mesoderm, notochord, posterior wall of neurenteric canal, somite	in situ hybridization
Lhx1 is required for specification of the renal progenitor cell field. Paper	laevis	1 image	NF stage 32	early proximal tubule, late proximal tubule	in situ hybridization
Polycomb and bmi-1 homologs are expressed in overlapping patterns in Xenopus embryos and are able to interact with each other. Paper	laevis	1 image	NF stage 28	somite	in situ hybridization
Acosta H et al. (2015) Assay Paper	laevis	1 image	NF stage 18	circumblastoporal collar	in situ hybridization
Northrop JL and Kimelman D (1994) Assay Paper	laevis	4 images	NF stage 12 to NF stage 15	circumblastoporal collar, involuted ventral mesoderm, mesoderm	in situ hybridization
BMP-4 regulates the dorsal-ventral differences in FGF/MAPKK-mediated mesoderm induction in Xenopus. Paper	laevis	1 image	NF stage 12	mesoderm	in situ hybridization
A consensus Oct1 binding site is required for the activity of the Xenopus Cdx4 promoter. Paper	laevis	1 image	NF stage 11 to NF stage 29 and 30	circumblastoporal collar, mesoderm, tail bud	in situ hybridization
Pinhead signaling regulates mesoderm heterogeneity via FGF receptor-dependent pathway. Paper	laevis	1 image	NF stage 12	mesoderm	in situ hybridization

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