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Gene/Clone	Species	Stage	Anatomy Item	Experimenter
lhx9	xenopus		forebrain [+] telencephalon,diencephalon,hypophysis,optic stalk,hypothalamus,optic chiasm,suprachiasmatic nucleus,optic tract,olfactory bulb,infundibulum,anterior hypothalamus,posterior hypothalamus,lateral ganglionic eminence,subpallium,medial ganglionic eminence,eminentia thalami,pallium,pretectum,prethalamus,zona limitans intrathalamica,thalamus,dorsal thalamus,accessory olfactory bulb,amygdala,anterior amygdala,anterior commissure,anterior entopeduncular nucleus,anterior thalamic nucleus,basal forebrain,basal ganglion,bed nucleus of the stria terminalis,central amygdala,central nucleus of the thalamus,dorsal habenular nucleus,dorsal pallidum,dorsal pallium,dorsal septum,external plexiform layer of the olfactory bulb,glomerular layer of the olfactory bulb,granule cell,granule cell layer of the olfactory bulb,habenula,lateral amygdala,lateral forebrain bundle,lateral hypothalamic nucleus,lateral pallium,lateral septum,magnocellular preoptic nucleus,medial amygdala,medial pallium,medial septum,mitral cell,mitral cell layer of the olfactory bulb,nucleus accumbens,nucleus of the diagonal band,pallidum,preoptic area,telencephalon septum,striatum,subcommissural organ,subthalamic nucleus,ventral habenular nucleus,ventral hypothalamic nucleus,ventral pallidum,ventral pallium,ventrolateral thalamic nucleus,ventromedial thalamic nucleus,prosomere,prosomere 4,prosomere 5,prosomere 6,mammilary region,tuberal region,third ventricle,caudal tuberal region,rostral tuberal region,prethalamus basal plate,retromammillary area,ventral septum,supraoptoparaventricular region,anterior entopeduncular region,melanotrope,adenohypophysis,neurohypophysis,pars distalis,pars nervosa,pars intermedia,dorsal telencephalon,amygdala,anterior amygdala,anterior entopeduncular nucleus,basal ganglion,bed nucleus of the stria terminalis,central amygdala,dorsal pallidum,dorsal septum,lateral amygdala,lateral septum,medial amygdala,medial septum,nucleus accumbens,nucleus of the diagonal band,pallidum,pars nervosa,striatum,subthalamic nucleus,telencephalon septum,ventral pallidum,ventral septum,amygdala,basal forebrain,basal ganglion,neurohypophysis,nucleus of the diagonal band,optic nerve,pallidum,striatum,telencephalon septum

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Expression summary for lhx9

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Experiment	Species	Images	Stages	Anatomy	Assay
Atkinson-Leadbeater K et al. (2009) Assay Paper	laevis	1 image	NF stage 29 and 30 to NF stage 33 and 34	diencephalon, telencephalon	in situ hybridization
Illes JC et al. (2009) Assay Paper	tropicalis	1 image	NF stage 31	forebrain, pretectum, thalamus	in situ hybridization
FGF receptor dependent regulation of Lhx9 expression in the developing nervous system. Xenbase Image	laevis	1 image	NF stage 25	telencephalon	in situ hybridization
LIM-homeodomain genes as developmental and adult genetic markers of Xenopus forebrain functional subdivisions. Paper	laevis	1 image	adult frog stage	amygdala, anterior thalamic nucleus, central nucleus of the thalamus, diencephalon, forebrain, [+] lateral amygdala, pallium, subpallium, thalamus, ventral pallium, ventrolateral thalamic nucleus	in situ hybridization
LIM-homeodomain genes as developmental and adult genetic markers of Xenopus forebrain functional subdivisions. Paper	laevis	1 image	NF stage 46 to NF stage 55	amygdala, bed nucleus of the stria terminalis, diencephalon, forebrain, lateral amygdala, [+] lateral septum, prosomere, prosomere 4, subpallium, telencephalon septum	in situ hybridization
LIM-homeodomain genes as developmental and adult genetic markers of Xenopus forebrain functional subdivisions. Paper	laevis	1 image	NF stage 66	diencephalon	in situ hybridization
Evidences for tangential migrations in Xenopus telencephalon: developmental patterns and cell tracking experiments. Paper	laevis	1 image	NF stage 42 to NF stage 59	subpallium	in situ hybridization
Zhang S et al. (2014) Assay Paper	laevis	2 images	NF stage 28 to NF stage 35 and 36	diencephalon, forebrain	in situ hybridization
The Lhx9-integrin pathway is essential for positioning of the proepicardial organ. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 39	forebrain	in situ hybridization
The Lhx9-integrin pathway is essential for positioning of the proepicardial organ. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 46	forebrain	in situ hybridization
The Lhx9-integrin pathway is essential for positioning of the proepicardial organ. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 46	forebrain	in situ hybridization
LIM-homeodomain genes as developmental and adult genetic markers of Xenopus forebrain functional subdivisions. Paper	laevis	1 image	adult frog stage	amygdala, anterior thalamic nucleus, bed nucleus of the stria terminalis, central nucleus of the thalamus, diencephalon, [+] forebrain, lateral amygdala, lateral pallium, medial amygdala, pallium, pretectum, telencephalon septum, thalamus, ventral pallium, ventral septum	in situ hybridization

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