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Gene/Clone	Species	Stage	Anatomy Item	Experimenter
sox9	xenopus		eye [+] lower eyelid,lens,retina,ciliary marginal zone,cornea,globe,conjunctiva,sclera,iris,ciliary body,optic nerve,lens placode,pupil,choroid fissure,photoreceptor layer,retinal neural layer,retinal pigmented epithelium,retinal outer plexiform layer,retinal outer nuclear layer,optic fiber layer,retinal inner nuclear layer,inner limiting membrane,retinal ganglion cell layer,outer limiting membrane,retinal inner plexiform layer,lens epithelium,lens transitional zone,lens fiber cell mass,horizontal cell,bipolar neuron,amacrine cell,retinal ganglion cell,eye photoreceptor cell,retinal stem cell region,retinal progenitor cell region,central retina,peripheral retina,choroid,retinal stem cell,retinal progenitor cell,Muller cell,optic disc,lens epithelium,lens fiber cell mass,lens transitional zone,lens

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Expression summary for sox9

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Experiment	Species	Images	Stages	Anatomy	Assay
Light W et al. (2005) Assay Paper	xenopus	1 image	NF stage 28	eye	in situ hybridization
Harland Lab Assay Harland Lab	tropicalis	2 images	NF stage 25 to NF stage 33 and 34	eye, lens placode	in situ hybridization
Paper	laevis	1 image	NF stage 22 to NF stage 24	eye	in situ hybridization
Serotonin 2B receptor signaling is required for craniofacial morphogenesis and jaw joint formation in Xenopus. Paper	laevis	1 image	NF stage 26	eye	in situ hybridization
Paraxial T-box genes, Tbx6 and Tbx1, are required for cranial chondrogenesis and myogenesis. Paper	xenopus	1 image	NF stage 27	lens placode	in situ hybridization
Runx2 is essential for larval hyobranchial cartilage formation in Xenopus laevis. Paper	laevis	1 image	NF stage 33 and 34	eye	in situ hybridization
Serotonin 2B receptor signaling is required for craniofacial morphogenesis and jaw joint formation in Xenopus. Paper	laevis	1 image	NF stage 28	eye	in situ hybridization
Sox10 regulates the development of neural crest-derived melanocytes in Xenopus. Paper	laevis	1 image	NF stage 32	eye	in situ hybridization
RIPPLY3 is a retinoic acid-inducible repressor required for setting the borders of the pre-placodal ectoderm. Paper	laevis	1 image	NF stage 32	lens	in situ hybridization
The protein kinase MLTK regulates chondrogenesis by inducing the transcription factor Sox6. Paper	laevis	1 image	NF stage 39 to NF stage 41	eye	in situ hybridization
Rankin SA et al. (2014) Assay Paper	laevis	1 image	NF stage 35 and 36	eye	in situ hybridization
A gene expression map of the larval Xenopus laevis head reveals developmental changes underlying the evolution of new skelet... Paper	laevis	1 image	NF stage 33 and 34	eye	in situ hybridization
Tae HJ et al. (2015) Assay Paper	laevis	1 image	NF stage 26 to NF stage 32	eye	in situ hybridization
Griffin JN et al. (2015) Assay Paper	tropicalis	1 image	NF stage 28	eye, retina	in situ hybridization
Patient Lab	laevis	1 image	NF stage 29 and 30	eye	in situ hybridization
Sox9 function in craniofacial development and disease. Paper	laevis	2 images	NF stage 20 to NF stage 28	eye	in situ hybridization
Pa2G4 is a novel Six1 co-factor that is required for neural crest and otic development. Paper	laevis	1 image	NF stage 28	eye, retina	in situ hybridization
Timing is everything: Reiterative Wnt, BMP and RA signaling regulate developmental competence during endoderm organogenesis. Paper	laevis	1 image	NF stage 37 and 38	eye	in situ hybridization
Six1 proteins with human branchio-oto-renal mutations differentially affect cranial gene expression and otic development. Paper	laevis	1 image	NF stage 28 to NF stage 32	eye	in situ hybridization
Sullivan CH et al. (2019) Assay Paper	laevis	2 images	NF stage 24 to NF stage 28	eye	in situ hybridization
Using Xenopus to analyze neurocristopathies like Kabuki syndrome. Paper	laevis	1 image	NF stage 29 and 30	eye, lens	in situ hybridization

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