XB-CLONE-3640914
Clone Name: IMAGE:7659983
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Gene:
slitrk3
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC154108 [+]
CAGCTAAAGAACTGGCTAGAACGTATCCCATATACTGTTCTGGTCGGAGATATTACATGTGAAAGTCCATTTCATTTTCATGGCAAAGATCTGAGGGATA
TAAAACGTAGTAAGCTCTGCCCCTCATTAACTGAAAGTGAAGCTGAAATAAGTTGGGGGATTCCCCAGATACCATCTAGCAAAGAAAATGCATGGCCAAC
AAAACCATCCTCTATGCTGTCTTCTTCTCATGTCACTGCTTCATCTGTGGAGTACAAGTCATCTAATAAACAACCGACAACCACAAAGCAACCTAGAGCT
CCCAAGCCTCCACCAACACCTAGAGGTCTGTATCCAGGCCCAAACCAACCCCCTATAGCGGGATATCAGACGCGACCACCCATTCCAATTATATGTCCTA
CTGGCTGTTCATGTAGTTTGCATATTAATGATTTGGGATTGACTGTCAATTGTAAAGAGAGAGGATTTCACAACATATCAGAACTTCTACCCAGGCCACT
CAATGCTAAAAAGCTCTACTTAAATGGTAACTTAATTCAGAAAATTTACAGGTCGGATTTTTGGAATTTTTCTTCTTTGGATTTATTACATCTGGGAAAT
AACCGCATATCGTATGTGCAAGAGGGAGCCTTTGTTAATCTCCCCAATTTGAAAAATTTGTATCTGAATGGGAATGACATTGAGAGGCTAACTCCTGGCA
TGTTCAGGGGTTTGCAAAGTTTGCATTATTTATACTTTGAATATAACACCATAAGGGAAATCCAGCCTGCTGCTTTTAGTTTGATGCCAAATCTGAAACT
GCTCTTTCTCAATGACAATCTGCTCAGAACCCTTCCAACTGACACTTTTGCTGGCACTTCTTTGTCCAGACTTAATCTGAGAAATAACCACTTTCTTTAC
CTTCCTGTCACAGGGGTTTTGGAGCACCTTAATGCTATAGTTCAGATTGATCTCAATCAAAATCCATGGGATTGTACCTGTGACATTGTTCCTTTAAAGC
AGTGGATAGAAACCATCAGCTCAGTCATTGTTGTTGGAGAGGTTTTATGTGCAAGTCCTGAAAATCTGACAAATAAGGATCTAAAATCAATTGACATGAA
AGTTTTGTGTCCAGAATTACTCGATTCTGAAGCTGCTGCTTCACCTGCTCTGCCTGGTAACATGGTGCCGACAAGTTCATCAGTATTTGAGTTTACCACA
CCAGGGGGTGCCATTCCACTGTCTGTCCTTATCCTCAGTCTTTTAATTCTTTTTTTCTCAGCTGTTTTTGTGGCAGCAGGTCTGTTTGCTTTTGTACTAA
GAAGGCGTAAGAAACTGCCTTTCCGGAAGAGACAAGAGGTGGATTTGACTGGCATTCAGATGCAGTGCAGGATCTTTGAGGACAGGCAGAGCAACTCCCC
AGAAAAGGCCCCTGGTCATGTCTATGACTACATCCCACACCCAGTAACCCAGATGTGCAACAATCCCATTTATAAGCCCAGAGAAGAAGAAATGGGAGAG
CAATTTTCAGAGACAAAGGAAAATAACACCAATTACAGGACTTTAATAGAAAAAGAGAAAGAGTGGACTATGGCAGTATCAAATTCCCAGTTAAATACAA
TAGTCACTGTAAATCAGTCTGGGGACATACCAAGTTTTCATGAAAATGGGGTCATTTTTCCCGGTGTAATCGATCGAGAAAGGCCAGCTCCCACAGTGGG
CTTTGTGGACTGCCTTTATGGCACTGTACCCAAATTAAAGGAACTGCACGTGCACCCCCCTGGAATGCAATATCCTGATTTGCAGCAGGATGCCAGATTA
AAAGAAACCCTTCTTTTCTCAACTGGAAAGGGGTTCTCAGACCAAACCCAAAGTGAATACCTCGAGTTAAGGGCCAAACTCCAAACAAAGCCAGATTACC
TCGAAGTCCTGGAAAAAACAACGTATAGGTTCTAGTATAGCATCATTTCATAGTGCCCACAAACGCATGATTGAAGACGAAACCGTTGTGCTCCCCAAAT
TGTTTTGGAGGAAGGGCCATACTCTAATCATACTTAATTGAAGTGCCTTTGCAGACTTTTGCCAGCAATGTTATCAATCATTATTTTTTATATAGGAGTC
TAAGAAACTTGACTGTGCCATGTAAGGTATGGGGAGATTTGTACTGATCCTGGTAAATAATTCCACGTGTCTTTTTTGGCAGTAACTTATTTTTTTTCTC
TAGGGGGGAATAGGATGGCATTGTGGCTTCCTTACACAAAGAAACGCCCATGGCACAAATCCTGTATATTGATGCAGTTTGCTGCATGCCTAAAAACTGC
AGGGGAGGGTAATGCTCGAATGTTCTCACCCAAAACATCATTATATTTCCTAAAGCAACAAGACCCTGGAGTTACTGCAATGCTTTATTGTTCAACGTTT
ATTTGATTTATCACAATTTCCCAGTGCAGAAAAGCAATGATATTCCAAACACCCGGGGATCAACATGATGGGATTTTCTGCAGCTCATTGCATTTTCTTT
TTCTTTTCTAAAAAAAAAAAAATTGATTTCCTTTTCTTTTTTTTAAGAAATGCTACTGGGTATGTATCACTAACAGCTTTGTAGGAAGCACTTTTAATGT
TCTCTCCCCTCCTTACTCCTCAGCCTACCCACATAAACAAAGATTTAAACAAATGTGCATATATTTATTCTGTAATTTCAGTGACTATTAATTGTAAAGG
TAATGTTTAATCAATGTATAGTGATTATGCGTCTGGTACAGCTTTCCTAATAAAATAATTTAAATGATACATATACAGATATATACAAAAAAAAACCTGG
CTTGATGATACAGTTTAGCTATGCCCAACCTAGTGTATTTCTACACAAAAGGTCAACACATAAACCACTGCTTCACTGAAATCAGTTCGGCAGCATGGGT
TCAAGCACTATGGGTGATTCCTAAACAGGCTACTGAATGGCATTTCCATACGATTCATACCCCAGGGGACTCAGAACTGCTTTTCTGTAGATTTATCAGT
AGGAAAGATATTAATAATGTAAAGAGAGAATACAGGCAAAATCCTATACAAATGAAGTAATTACTCAACAAGACAAGGTCATTTACTTTATTTATAAACT
GTATTTTGAAAAATGAGATTTCTGGTGCACACTCTTTTGTTATTTATCTTTGGCTTTCCTCCTGGTGCCATAGCCCATACCGGTTAAAGTTACAATGCAT
TACTGCAATAATATTAATGTTGTTATGAGTTATTCACTATACATTACAAACTGTGTTCTGTAAAAATAGACATCAAATGAAAAAAAGAGGTTATAAATCC
TCAAGGGAACCCAAAGAATAGCTATTTTTCCTTTGTAAGTTATCCAAGTTTGTAGGAGCTGGTTAAAATAAGAATGCATTCATGCAACTGAACAGGAGGG
GGAGCTTTAGTCTTAAAATTATACATTTGGCAGCCAGTTCCTTTGTAGATCTGCATTCACCCACGTCCAGCAATTCAGCCACCCCCAGATGTCTTTTCCT
TGGCTTTATTTTCTGTCTAATATAGTTCCTTAATATAACCATTACTGCACACCGAATGTAAATTGTAACACATCGCAAATGCCTTATATCAAAAGGAAGG
GAGAATGTGGGAAAATAGAGAGTTGTCTTATTTTGTCTTTTCCGTGAAATCATCTGCCCTCTTGATTTATTACACATTGATATATTTTATTTTTTGACCA
CTGTGATATTCCTCTCTCTCTCTTTAGCAAATGTTAGTCTCTCCTGTTATAGCTTTATTTATAATCCTTTACATGCATATTGTTCTGTACATTTAGAATG
TAGGTAGGGGGAATTATTCCTATTGTCTGCTCAGGTTACCAAGGTTTAATGAAGTGAAACAATTTTCTCTCAAAGAGATGAAGAGACATTTAATGTGCAA
TATATAGTTCAGCAGCTGTCACATAGTTTAATGGAATCCCCCAGATCATAGATGCTAGCATTGTGGTCCCCTGGCCATTGTGAACTACAAGCATCTGCAT
CCCCACAGGATGCTGGGATGTGTAGTTCGCAAGCAGCACAAAAGCCACAAGCTTGATAATTGTGCCCTAGCTGACTTCTGATTCAGTAAGCAGACGTGAC
ATGTATCATCATTACTCTTAAGGATACGTTGGGGCTTCATGTGTTTATTTCATACATTTCCTCGGTTCTGTTGTTTGACCACGATTCTGAAATGTGTATG
TTTTAAATTATTCTGTGTTTCCAAAAGCTTGATTTACTGGCATCTTATTCATTTTGTCCTGACAGGTTCTAGAAACATATTATTCACTGTAAAATGTGTC
TTGCTGCATTCATTACTTCTATTTATAGAGAGCATGCACTCATTTGAAGGCTAAATTAAAGTGCAAGGCCAGCTATAAAATATCACTAAAGATTCATTTA
TTGTGGGCATGCATTAGGCAGAAGAATTTCTTTATTTTCTGTTTTTCGACCAGTACCAGCTTTCTGTGTTGCTAATGCTGTATCCATCTGAGACATGAAC
TCGCCTAATCCATAGCAAACTATAATGCCGCTGTGTTTATATCTCTATTTTGTTTTAACCGATGAAGCAGGACACAGGCAAGAAATTTCCATCCACCTGG
CAGCAAATCCCCCCATTTGGGAGGAAAATATATTTATTCTGTGAAAATAATTTTATTATGGAAGAATGGATATTTTTAAATAAAAGTGATATGGGCTTTT
TAAAAAAAAAAAAAAAAAAAAAAAAAAA
5' EST: CX840165 [+]aaagaactggctagaacgtatcccatatactgttctggtcggagatattacatgtgaaagtccatttcattttcatggcaaagatctgagggatataaaa
cgtagtaagctctgcccctcattaactgaaagtgaagctgaaataagttgggggattccccagataccatctagcaaagaaaatgcatggccaacaaaac
catcctctatgctgtcttcttctcatgtcactgcttcatctgtggagtacaagtcatctaataaacaaccgacaaccacaaagcaacctagagctcccaa
gcctccaccaacacctagaggtctgtatccaggcccaaaccaaccccctatagcgggatatcagacgcgaccacccattccaattatatgtcctactggc
tgttcatgtagtttgcatattaatgatttgggattgactgtcaattgtaaagagagaggatttcacaacatatcagaacttctacccaggccactcaatg
ctaaaaagctctacttaaatggtaacttaattcagaaaatttacaggtcggatttttggaatttttcttctttggatttattacatctgggaaataaccg
catatcgtatgtgcaagagggagcctttgttaatctccccaatttgaaaaatttgtatctgaatgggaatgacattgagaggctaactcctggcatgttc
aggggtttgcaaagtttgcattatttatactttgaatataacaccataagggaaatccagcctgctgcttttagtttgatgccaaatctgaaactgctct
ttctcaatgacaatctgctcagaacccttccactgacacttttgctggcact
3' EST: CX840164 [+]aaaaagcccatatcacttttatttaaaaatatccattcttccataataaaattattttcacagaataaatatattttcctcccaaatggggggatttgct
gccaggtggatggaaatttcttgcctgtgtcctgcttcatcggttaaaacaaaatagagatataaacacagcggcattatagtttgctatggattaggcg
agttcatgtctcagatggatacagcattagcaacacagaaagctggtactggtcgaaaaacagaaaataaagaaattcttctgcctaatgcatgcccaca
ataaatgaatctttagtgatattttatagctggccttgcactttaatttagccttcaaatgagtgcatgctctctataaatagaagtaatgaatgcagca
agacacattttacagtgaataatatgtttctagaacctgtcaggacaaaatgaataagatgccagtaaatcaagcttttggaaacacagaataatttaaa
acatacacatttcagaatcgtggtcaaacaacagaaccgaggaaatgtatgaaataaacacatgaagccccaacgtatccttaagagtaatgatgataca
tgtcacgtctgcttactgaatcagaagtcagctagggcacaattatcaagcttgtggcttttgtgctgcttgcgaactacacatcccagcatcctgtggg
gatgcagatgcttgtagttcacaatggccaggggaccacaatgctagcatctatgatctgggggattccattaaactatgtgacagctgctgaactatat
attgcac
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
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