XB-CLONE-3648183
Clone Name: IMAGE:7655883
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Gene:
dmrta2
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC136032 [+]
GACCTGCTGCCTGGCATCGGATCTCTCACCTCTCCGGGGAAGTCGCTGGTCTGACAGCCCAACCGGCAGCCTCTACACCTGGGTGCAGTTTATCAGTTTA
TGTGGGAGAGGTGTGTGCCTGTGGGGGAGACCAGGCTGTGGGTCGGGGGTGAGTGGCCTGAGGGGAGTCGGGGCTAGAGAGTAAGCTGTGTGGGTGAAAG
GTACTGAGGGCAAGTTCTGCGCTAATCTATTCTGTCGGATTGGGATACAAATCTATTGGCCCTAATGAGATAATCTGTTGGTACCTGACTGAATGGAAAG
GGCACAGGTTTAGGCGGGCACAAGGGCAGTCTATGGGATTGTGTAGAAAAAAACCCAAACAGCTCACCTTACATTTCTTTAGAACTTAATTTACTGCTGT
TTCTTGGGGATTTAAGTTTAGTGCCAGTCTGTGTATAGTGCAGACCAGTAAGGCTGGAGCTTTTGCCTTTTGCCATCCCCTGTGTCACTGGGTGAGTGGG
TGAGTGGGTAAGGCTGGGGCACCGGGTTATATAGAGGGGCCAGTACACCTGTCATTCATTATAAAGATTATAGGGGGATAGAGTGTAGTAAATCAATTCT
AGAATGGAACTGAATGGACCCCCAGTTTCCCAGCTTCCTCAGACCGCAACTTCTACCGCATCACTTCCAGTCACAGTGGCCGGTACTCTCCTACGTGGCC
CCCAGCTGCTGCTCCGAGCCGCAGAGAAGTATCCCCGTACCCCCAAGTGCGCCCGCTGCAGGAATCACGGGGTAGTGTCTGCGCTCAAGGGCCACAAGCG
CTACTGCCGCTGGAAAGACTGTATGTGCGCAAAGTGTACGCTGATCGCGGAGCGCCAGAGGGTTATGGCCGCGCAAGTTGCGCTACGCAGGCAGCAAGCC
CAGGAGGAGAATGAGGCCCGAGAGCTGCAGCTTCTCTATGGAACTGCTGAAGGATTGGCACTGGCGGCAGCCAATGGCATCATCCCACCCCGGCCAGCCT
ACGAGGTCTTCGGATCGGTGTGTACAGAGGGAGGAACAGATTCAAAGATTCAGAAGTTCGACTTGTTCCCTAAAAGCCTCATCCCCAGATCTGTGACTCC
TCAACTGTCTTCTGGGGGAAAACCAGTGTCCCCAGACAGTGAATCGGTGTCAGGCAGTGCACCAGGTGCCTCATCCCCTGAAGCACGGCCTGGTTCTGGC
TCGGAAAATGGGGATGGGGAGTCCTTGCTCAGTTCCCCCATCTCTAAGGCACTCAAAGAAGGAGAGGAGAGCCCAAGCTCAATTAGCCCCCTGGGCTCAG
AATCTGGATCTGATGCTGAAAAAGATGAGCAGGATCCCAGTTCTTCCTCCTCAGCCAGGCAGAGGACCCCCATAGACATCCTGACCAGGGTCTTCCCTGC
TCAGAAGAGGAGCGTTCTGGAACTGGTGCTGCAGGGCTGTGGGGGAGATGTGGTTCAAGCAATTGAACAGATACTAAACAACAGGGGACAGGATAAGAGT
GAAGAGACCTGGTCAAGAGATGGAGCCCTCCCAAGTATTCAGCCATCAGTGTCCTCCACACACAGACCCCTTATTGCTGGAGCCCTTACTCCTGCTATTG
GCACATTAGGGAGCAGGTCTGCATTCTCCCCTTTACAACCCAATGGCGCACACTTTGGCACTGAGGCTAATGCATACCAGCTTGGTGGGCACCTTGGGTT
AAACCCACTGAGGTTAGCCTATTCTGCGCACAGTAGAGGACTTGCTTTCATGGCCCCTTACTCAACAGCTGGTTTCATGCCTACCCTTGGCTTTCGCCCA
CCCATGGACTACGCCTTCAGTGACCTTATGAGGGACAGGGCCAATGTTCACAAGGACCAGGTATACACTAATGGACTCTATGGGCCAGTGGTCAATAATA
ATGCTGAAAAACAATGAATTCTTTATATAAGGACCTGAAAAACCTGTGGCTTGCAGGCTCAGATTCTGATTTTAGGGTATTTCCATGGGTTTGGATAACA
AATGTCATAAAGTCTTAAGAACATCTCAAGTAATCAAGAAGTCTGAAGCCCAGTCTGGAGAATGAACTAGTTAGGTAGAGCACTGTAAAGACATTCCTAT
TCTCTGCAAGGCAACGTGATGCTTTCTGGATTTTTGGAGGACATGGAAATTCCTAAATCATTATAAAATACAAACTGCACTTTTTCTGTTAATAAAAGGG
GTGACGTTATTTCTGCTTAAGGATATAAGCACGGACACAAGTCCCAATCCATTGTGATATTATAAATATATACATATATAAATATATAGACTTCTAATGT
TATGAGCTGGGATTCTAAGTTATTCTTGTACATTGGCATTGAACCCTTTCTCATGATAACAAGGAGCCCTGTTATGGCACGCTACAAGTGCAACAGGGTG
CAGCAGCATAGACTGCTCTGTGTGTACAGATGTGGGTAGGAATGGGGGGGGGCAGCATTCAGATCCCCCTTTATTTGGTGAATTTCAAACCATTGCTGTT
GGTTTAATTGTTTAGAAAATTGTTAACACCTTTATGTGACCGTTCCCTAAGCATTAGAAATAAATGTTATTTTCTAAAAAAAAAAAAAAAAA
5' EST: CX826150 [+]cctgctgcctggcatcggatctctcacctctccggggaagtcgctggtctgacagcccaaccggcagcctctacacctgggtgcagtttatcagtttatg
tgggagaggtgtgtgcctgtgggggagaccaggctgtgggtcgggggtgagtggcctgaggggagtcggggctagagagtaagctgtgtgggtgaaaggt
actgagggcaagttctgcgctaatctattctgtcggattgggatacaaatctattggccctaatgagataatctgttggtacctgactgaatggaaaggg
cacaggtttaggcgggcacaagggcagtctatgggattgtgtagaaaaaaacccaaacagctcaccttacatttctttagaacttaatttactgctgttt
cttggggatttaagtttagtgccagtctgtgtatagtgcagaccagtaaggctggagcttttgccttttgccatcccctgtgtcactgggtgagtgggtg
agtgggtaaggctggggcaccgggttatatagaggggccagtacacctgtcattcattataaagattatagggggatagagtgtagtaaatcaattctag
aatggaactgaatggacccccagtttcccagcttcctcagaccgcaacttctaccgcatcacttccagtcacagtggccggtactctcctacgtggcccc
cagctgctgctccgagccgcagagaagtatccccgtacccccaagtgcgcccgctgcaggaatcacggggtagtgtctgcgctcaagggccacaagcgct
actgccgctggaaagactgtatgtgcgcaaagtgtacgctgat
3' EST: CX826149 [+]agaaaataacatttatttctaatgcttagggaacggtcacataaaggtgttaacaattttctaaacaattaaaccaacagcaatggtttgaaattcacca
aataaagggggatctgaatgctgcccccccccattcctacccacatctgtacacacagagcagtctatgctgctgcaccctgttgcacttgtagcgtgcc
ataacagggctccttgttatcatgagaaagggttcaatgccaatgtacaagaataacttagaatcccagctcataacattagaagtctatatatttatat
atgtatatatttataatatcacaatggattgggacttgtgtccgtgcttatatccttaagcagaaataacgtcaccccttttattaacagaaaaagtgca
gtttgtattttataatgatttaggaatttccatgtcctccaaaaatccagaaagcatcacgttgccttgcagagaataggaatgtctttacagtgctcta
cctaactagttcattctccagactgggcttcagacttcttgattacttgagatgttcttaagactttatgacatttgttatccaaacccatggaaatacc
ctaaaatcagaatctgagcctgcaagccacaggtttttcaggtccttatataaagaattcattgtttttcagcattattattgaccactggcccatagag
tccattagtgtatacctggtccttgtgaacattggccctgtccctcataaggtcactgaaggcgtagtccatgggtgggc
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
Suppliers: