XB-CLONE-3653894
Clone Name: IMAGE:7652441
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Gene:
shank2
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC124569 [+]
TTCCTTGCAGCCTCCAGTAGCCCTGGGAATGGGCTTTTGATGCAAGGCAATTTGGATTTCATGTGTGCCTTCTTTCCAACTGGGGGAGACAGGAGGAGAG
ACCCCACTTTTAAAGTGATGCCTCCCGATTTTGCCACCGGCTGGTTTAGCGGCGGCTCGGCCGGGGGATGCCTTGCTTGGATTTACAGCTGAAGATTTTA
TTAAGGAGATCATTATTCACTTTATTTATTCTTTTTATTCCGTACCCCCCCTCCGTTGGCCGCCCTGTCTAGCACACAGCTGACATGATTACACATTCCC
CCAGCCATTTGTACGTAGCGGAGATCAGCATGCCCGCTGTCTGCCTCCCTCGCTCCTCTTCCTCCTTCTTGCAGCTTTTCCACTATGTCACATCGGATTA
ATTGGTCTTTTTTTTTTTTTTTTTGCCCCCCCCTTATGCATTTCTTTCCTGATTTTTCTTCTTTAATGTTAATGCTTGCCACCTGCACTGCTTGTCTGAG
TAATTGCCTGTGACGGTAACGATGATGAAGATGCGTTCTCGAAGACCGACTGCTGCAGTCATGATGAGAGGGTTTAATAACAGCCGTTATGCTCGACATT
CTCCCTACAGTGACTGCATCATCGAGGAGAAGACCGTGGTGCTCCAGAAAAAGGACAATGAAGGTTTTGGATTTGTGCTCCGAGGGGCAAAGGCTGATAC
ACCTATTGAGGAGTTCAACCCAACACCAGCCTTTCCGGCCCTGCAGTACCTGGAGTCAGTGGATGAGGATGGGGTGGCTTGGCAAGCCGGCCTACGCACT
GGGGACTTCCTGATTGAGGTCAACAACGAGAATGTGGTGAAAGTTGGCCATCGGCAGGTAGTGAACATGATCCGGCAAGGGGGCAACCACCTCGTCCTCA
AGGTTGTGACGGTGACCAGGAATCTGGATCCGGATGATACGGCGAGGAAGAAAGGCATCACCGAGGAGGAACGGCAGTTTTTAGCGCCCCCTATGTTGAA
GTTTACTAGAAGTTTATCCATGCCAGATGCCTCTGAGGATATCCCGCCTCCACCAGCAACCTTACCACCATCACCGCCACCTCCTTCACCATCTTCTTTC
AACTCCCCTAAATCTCCAGCTCCCAGGGGGTACGGAACCATTAAGCCGGCCTTCACCCAGAATTCAGGAACAAAGTCTCCGTCGCCAGCCGTACGGTCGG
ACAACGTCGGGACAATCGCCAGAGACAAAAGTATGTTCTACAGGCACGAGGCCAACAGGTTCTCCTTGGACTCTGAGGAGCTGTACAACGCCAGCATGGC
CAACCAGCAGAACTTTATCAACAAAAGAAGCAAAATGCCCGAAAACCCTTACTCCGAAGTAGGAAAATTAGGAAATAAAGCGGTGTATGTTCCAGCCAAA
CCTGCCCGGCGGAAGGGAATGCTGGTGAAACAGTCCAACGTGGAGGACAGCCCTGAAAAGACCTGTTCCATTCCCATCCCAACAATCATCATTAAAGAGC
CTTCAACCAGTAGCAGCGGCAAGAGCAGCCAGGGCAGCAGCATGGAGACGGACCTCCAGATCTCAGAGCAAGTGGGGCAGTTGCGGCCTGATGATAGTCT
TAATGCAAGTAGTCCGTTTGCAGCTGCCATTGCTGGAGCAGTGAGAGACCGGGAAAAGAGACTAGAGGCCAGGCGCAATTCTCCAGCCTTCCTGTCAACG
GACTTGGGGGATGAGTGTGTGGGCCCCAAACCAAGCCCGAGGTTGCAGCATTCAAAGTCTATCGATGATGGAATGTTTTTCAACGATGAGCACACAAAGC
ATCTCATGGCCCCCAGCTCTTTGGTTCTCCCCAGAGGATCTTCCAATGCCTTCACCAACAACGACTCCAGCCATCAGGGGGATGTGAGCAATGCACGGAT
GTCTAAGATCAAAGGGCCTGAGAACAATGCAGCTCCAGCAAAAAGTACCAACTCCTCTGGTAATTACATGCATCCAGTTACAGGCAAGCTGCTCGATCCC
AACTCACCTCTGGCCCTGGCCTTGGCAGCTAGAGACAGAGCTCTGAAGGATCAAAACCAGCCCAGCCCTAGCCCTACAGATCCAGAAAAAGCAGATCTGA
ACAAGCCACTTTATATAGATACCAAGTTGCGCTCTGGCTTGGAGAGCTCCTTTTCCGTTGCAACAATCAATGCAAATAGACCGAACCAGAGAGGGAAGTT
GAAGAGACAGGAGACGGAGAGTAAGCACGACCTGGACTCATCCAAGGAGGAGAAACGGCAGGAAGAGAAAAAGAACATGCTGATCAACATCATGGACACC
TCTCAGCAGAAGACAGCTGGCCTGCTCATGGTACATACAGTAGACACCACCAAAGCAGATGATGCACTGGCTGAAAGTGAAGAAGCGGAGAAGGGCACGC
CACCTGAGAACTCTAATGCTCCAGTATCAGAACCCAGGGAAGAGTTAGAGAATTCCTTACCCAAGGCCAACGTGTTAGGAACCCCCGCAGCTCCCCTCAA
CAAAGCCATCGTATCCGTGTGCTCTGTGGAAGAGCCGGTTATCTTACCCTTCCGTATCCCTCCTCCTCCTTTTGCCTCAATGGATGTGGACGAGGACTTT
ATTTTTACCGAACCACTGCCTCCGCCGCTGGAGTTTGCCAACAGTTTCGAAATCCCTGAAGATGCTTCGCAAATGCCACCCGCTACTCTGGCTGATTTGT
TGATTCAGAGGAAGAACGGAGCTTTTCTTCCACCTTCATTTAATCCCAATGTTGCCTCGAATTCTATAGATAGCAAAAGGCCAGCGGTCCTGACTAACTG
CCTGCCCACCTCTTTCATGCAGCACCCCGAAAGCTTCGATAACGTGACTGACTCTGGGATCGAAGAGGCGGACAGCCGAAGTGGCAGCGACCATCACTTA
GAGACGACGAGCACTATTTCCACTGTTTCCAGTATATCGACCTTGTCTTCGGAGGGGGGAGAGAACCTGGACACATGTACAGTCTATGCAGATGGGCAAG
CGTTTCTAGTGGACAAACCCCCTGTACCTCCAAAGCCAAAAGTGAAGCCCATAATCAACAAAAGCAATGCACTTTATAAGGATGCTGTTCTAGAAGAGAA
CCTAGATAATTTTCCAGTCCCCCCTCCTGCTCCACCTCCTCTACCTTTAAGTATTCAGCCCAGCATGACCAAAGCTGGACAGCAAAGGACCTCCAAGTTA
TGGGGCGACAACACGGAAGTCAAAAGCCCAGTCATGCCAAGCCCCAAAGCCAATGTTATTAGTGAACTGAATTCCATTTTGCAACAGATGAACAGAGAGA
AAGCTACAAAGCCAGGGGAAGGGTTGGATTCACCCACTGGCATGAAAACTGCAAATCTCAGCACAAGGGGCACAGATGCCTTGAGTACAGTCTCAGGTAA
CAGAAGTACCACGGTCACTTTCACCATCCGCCCTGGAGCCAACCAGCCAATCTCGTTACAGAACAGGACACCCGAGTTTGAGGGCCGGGTTACAGGAATG
CGCCGCGCCCCCAGCCCTGTGGTATCACCAGCCGAGATCACGAGAGATATAAAGCCCGGCCCCCTGTCGGCTCCGCCGGCCTCCATGTCCGACGTCTTTA
TCTTACCCAGTCAGCCCCCCTCAGGGGACATGTTTGGGATGAGCATGGGGAGAAGTAGATCCCCTTCCCCTTCCATTTTACAGCAGCCAATCTCAAATAA
GCCTTTTTCTGCAAAGCCGGTCCACATGTGGACTAAACAGGACGTGGCAGACTGGCTGGAAAGCCTCCATCTAGGAGAACACAAAGAGATGTTTATGGAT
AATGAAATAGATGGAACCCACTTACCGAACCTTCAAAAGGAAGATCTAATAGACCTCGGAGTCACCAGAGTCGGCCACCGGATGAACATAGAGCGAGCTT
TAAAGCAGCTTTTGGACAGATAAAAGTACCTAGCGTTGCCTCGACGACTTTTTCTCCCCCCCTTTTCCACGACCCTTGTCTTTCCGACGGGCGAATTTCT
AAACGGGGGTCCCTGAAAACAAATTGAATTATCTTTCGTTACCGCAAGTTTAAATAGCTGTACAGATAATTTATAAAGCACAATATTTTACGGAGATCAA
GTGGCTGGTCTACTGGGCTGCCATGGTGCCACTTTGGTTCTAGAAAGAAAAAAAAAAAAACGAAAAAAAACTTTTGTGATTTAATAATACTATTTCTGTG
GAATAATTATTATAAAAAAAAAACGAAAAAAAAAAAAAAAAAAA
5' EST: CX815164 [+]ttccttgcagcctccagtagccctgggaatgggcttttgatgcaaggcaatttggatttcatgtgtgccttctttccaactgggggagacaggaggagag
accccacttttaaagtgatgcctcccgattttgccaccggctggtttagcggcggctcggccgggggatgccttgcttggatttacagctgaagatttta
ttaaggagatcattattcactttatttattctttttattccgtaccccccctccgttggccgccctgtctagcacacagctgacatgattacacattccc
ccagccatttgtacgtagcggagatcagcatgcccgctgtctgcctccctcgctcctcttcctccttcttgcagcttttccactatgtcacatcggatta
attggtctttttttttttttttttgccccccccttatgcatttctttcctgatttttcttctttaatgttaatgcttgccacctgcactgcttgtctgag
taattgcctgtgacggtaacgatgatgaagatgcgttctcgaagaccgactgctgcagtcatgatgagagggtttaataacagccgttatgctcgacatt
ctccctacagtgactgcatcatcgaggagaagaccgtggtgctccagaaaaaggacaatgaaggttttggatttgtgctccgaggggcaaaggctgatac
acctattgaggagttcaacccaacaccagcctttccggccctgcagtacctggagtcagtggatgaggatggggtggcttggcaagccggcctacgcact
ggggacttcctga
3' EST: CX815163 [+]cgttttttttttataataattattccacagaaatagtattattaaatcacaaaagttttttttcgtttttttttttttctttctagaaccaaagtggcac
catggcagcccagtagaccagccacttgatctccgtaaaatattgtgctttataaattatctgtacagctatttaaacttgcggtaacgaaagataattc
aatttgttttcagggacccccgtttagaaattcgcccgtcggaaagacaagggtcgtggaaaagggggggagaaaaagtcgtcgaggcaacgctaggtac
ttttatctgtccaaaagctgctttaaagctcgctctatgttcatccggtggccgactctggtgactccgaggtctattagatcttccttttgaaggttcg
gtaagtgggttccatctatttcattatccataaacatctctttgtgttctcctagatggaggctttccagccagtctgccacgtcctgtttagtccacat
gtggaccggctttgcagaaaaaggcttatttgagattggctgctgtaaaatggaaggggaaggggatctacttctccccatgctcatcccaaacatgtcc
cctgaggggggctgactgggtaagataaagacgtcggacatggaggccggcgg
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
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