Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.
Development October 1, 2009; 136 (20): 3451-61.

Smicl is required for phosphorylation of RNA polymerase II and affects 3''-end processing of RNA at the midblastula transition in Xenopus.

Collart C , Ramis JM , Down TA , Smith JC .

Smicl (Smad-interacting CPSF 30-like) is an unusual protein that interacts with transcription factors as well as with the cleavage and polyadenylation specificity factor (CPSF). Previous work has shown that Smicl is expressed maternally in the Xenopus embryo and is later required for transcription of Chordin. In this paper we search for additional targets of Smicl. We identify many genes whose onset of expression at the midblastula transition (MBT) requires Smicl and is correlated with the translocation of Smicl from cytoplasm to nucleus. At least one such gene, Xiro1, is regulated via 3''-end processing. In searching for a general mechanism by which Smicl might regulate gene expression at the MBT, we have discovered that it interacts with the tail of Rpb1, the largest subunit of RNA polymerase II. Our results show that Smicl is required for the phosphorylation of the Rpb1 tail at serine 2 of the repeated heptapeptide YSPTSPS. This site becomes hyperphosphorylated at the MBT, thus allowing the docking of proteins required for elongation of transcription and RNA processing. Our work links the onset of zygotic gene expression in the Xenopus embryo with the translocation of Smicl from cytoplasm to nucleus, the phosphorylation of Rpb1 and the 3''-end processing of newly transcribed mRNAs.

PubMed ID: 19783735
PMC ID: PMC2752395
Article link: Development
Grant support: [+]

Species referenced: Xenopus laevis
Genes referenced: chrd.1 irx1 zc3h3
Morpholinos: zc3h3 MO3

GEO Series: GSE4952: NCBI
References [+] :
Barrandon, Non-coding RNAs regulating the transcriptional machinery. 2008, Pubmed