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Summary Attributions Wiki
XB-MORPHOLINO-17249922
Morpholino Name: msx1 MO2
Synonyms: Msx1-MO
Target mRNA: msx1

Morpholino Type: splice blocking morpholino
Sequence: 5' TATAGGGTCAACTTACTTGTTGGG 3'

Source: Gene Tools LLC


Target mRNA laevis.L laevis.S
Identities 20/24 24/24
genome
MO
 
5' CCCAACAAGTAAGTTGACTGTGTT 3'
   ||||||||||||||||||  | | 
3' GGGTTGTTCATTCAACTGGGATAT 5'
 
5' CCCAACAAGTAAGTTGACCCTATA 3'
   ||||||||||||||||||||||||
3' GGGTTGTTCATTCAACTGGGATAT 5'
     
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr1S:16829242..16829265 24/24 Antisense target msx1.S
Chr1L:27093585..27093608 20/24 Antisense target msx1.L
Chr9_10L:33940090..33940113 21/24 Antisense off-target timp2.L
Chr3L:138603531..138603554 21/24 Antisense off-target rhobtb2.L
Chr6S:129660731..129660754 21/24 unknown
Chr2L:144112368..144112391 20/24 unknown
tropicalis 10.0 Chr10:22372592..22372615 21/24 Antisense off-target timp2
Chr6:146363552..146363575 21/24 Sense off-target trappc9
Chr7:84839970..84839993 21/24 Sense off-target LOC116412206
Chr6:13556157..13556180 20/24 Antisense off-target scn5a
Chr6:13556218..13556241 20/24 Antisense off-target scn5a
Chr6:25521926..25521949 20/24 Antisense off-target gpr158
Chr1:189494127..189494150 20/24 Sense off-target depdc1b
Chr3:133127622..133127645 20/24 Sense off-target LOC116409797
Chr1:69557327..69557350 21/24 unknown
Chr3:133323736..133323759 20/24 unknown
Chr3:146400165..146400188 20/24 unknown
Chr10:41472745..41472768 20/24 unknown
Chr6:71166904..71166927 20/24 unknown
Publications
???morpholino.displaySummary.papersFirst??? Msx1 and Msx2 have shared essential functions in neural crest but may be dispensable in epidermis and axis formation in Xenopus., Int J Dev Biol 2006            
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