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XB-MORPHOLINO-17250314
Morpholino Name:
six1 MO2
Synonyms: Six1MO2, six1
Target mRNA: six1
Morpholino Type: uncategorized morpholino
Sequence: 5' CGCACACGCAAACACATACACGGG 3'
Source: Gene Tools LLC
Synonyms: Six1MO2, six1
Target mRNA: six1
Morpholino Type: uncategorized morpholino
Sequence: 5' CGCACACGCAAACACATACACGGG 3'

Source: Gene Tools LLC
Target mRNA | tropicalis | laevis.L | laevis.S | ||
Identities | 24/24 | ||||
genomic MO |
5' CCCGTGTATGTGTTTGCGTGTGCG 3' |||||||||||||||||||||||| 3' GGGCACATACACAAACGCACACGC 5' | ||||
Genomic Alignments ![]() |
Position | Identity | Strand | Target | Target mRNA |
laevis 9.2 | chr8L:79054033..79054056 | 24/24 | Antisense | target | six1.L |
chr8S:97218905..97218928 | 21/24 | Antisense | off-target | tpm3.S | |
chr2S:97083094..97083117 | 20/24 | Sense | off-target | LOC108709734 [provisional:shox] | |
chr4L:16449321..16449344 | 20/24 | Antisense | off-target | Xelaev18022024m | |
chr4L:16449321..16449344 | 20/24 | Sense | off-target | LOC108713833 [provisional:brsk2] | |
chr4L:74859872..74859895 | 20/24 | Antisense | off-target | angptl3.L | |
chr4L:74859872..74859895 | 20/24 | Sense | off-target | dock7.L | |
chr4S:92859941..92859964 | 20/24 | Sense | off-target | tnrc6b.S | |
chr6L:96642048..96642071 | 20/24 | Sense | off-target | sall3.L | |
chr6S:76065488..76065511 | 20/24 | Sense | off-target | sall3.S | |
chr7L:8526784..8526807 | 20/24 | Sense | off-target | LOC108696071 [provisional:prkg1] | |
chr7L:8526907..8526930 | 20/24 | Sense | off-target | LOC108696071 [provisional:prkg1] | |
chr7S:78869027..78869050 | 20/24 | Sense | off-target | LOC108697787 [provisional:igsf1] | |
chr8L:30517035..30517058 | 20/24 | Sense | off-target | atg4a.L | |
chr8L:91199640..91199663 | 20/24 | Sense | off-target | ap4s1.L | |
chr8L:66866938..66866961 | 22/24 | unknown | |||
chr8S:18856073..18856096 | 22/24 | unknown | |||
chr6S:58347800..58347823 | 21/24 | unknown | |||
chr1S:170363553..170363576 | 20/24 | unknown | |||
chr1S:62762312..62762335 | 20/24 | unknown | |||
chr1S:62762868..62762891 | 20/24 | unknown | |||
chr4L:103118758..103118781 | 20/24 | unknown | |||
chr4L:1822954..1822977 | 20/24 | unknown | |||
chr4L:61110206..61110229 | 20/24 | unknown | |||
chr4S:74246071..74246094 | 20/24 | unknown | |||
chr5S:109054643..109054666 | 20/24 | unknown | |||
chr6S:105615958..105615981 | 20/24 | unknown | |||
chr6S:26381178..26381201 | 20/24 | unknown | |||
chr7L:69670670..69670693 | 20/24 | unknown | |||
Publications | |||||
First: |
Six1 promotes a placodal fate within the lateral neurogenic ectoderm by functioning as both a transcriptional activator and repressor., Development 2004 ![]() |
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Most recent: |
Mcrs1 interacts with Six1 to influence early craniofacial and otic development., Dev Biol 2020 ![]() |
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View All Papers |