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XB-MORPHOLINO-17250589

Morpholino Name: vegt MO5
Synonyms: VegT-MO
Target mRNA: vegt

Morpholino Type: uncategorized morpholino
Sequence: 5' CAGCAGCATGTACTTGGC 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 18/18 18/18 17/18
genomic

MO
5' GCCAAGTACATGCTGCTG 3' |||||||||||||||||| 3' CGGTTCATGTACGACGAC 5' 5' GCCAAGTACATGCTGCTG 3' |||||||||||||||||| 3' CGGTTCATGTACGACGAC 5' 5' ACCAAGTACATGCTGCTG 3' ||||||||||||||||| 3' CGGTTCATGTACGACGAC 5'
Genomic Alignments Position Identity Strand Target mRNA
laevis 9.2 chr1L:152589929..152589946 18/18 Antisense target vegt.L
chr1S:126235806..126235823 17/18 Antisense target vegt.S
chr1L:13268111..13268128 17/18 Antisense off-target c4orf48.L
chr7L:99246875..99246892 16/18 Sense off-target tnnt1.L
chr7S:62732712..62732729 16/18 Antisense off-target cdk11b.S
chr1L:201528780..201528797 16/18 unknown
chr3S:69101059..69101076 16/18 unknown
chr5L:149403136..149403153 16/18 unknown
Scaffold71361:156..173 16/18 unknown
Scaffold90:321895..321912 16/18 unknown
chr1L:103461483..103461500 16/18 unknown
tropicalis 10.0 Chr1:152855842..152855859 18/18 Antisense target vegt
Chr1:25811603..25811620 16/18 Antisense off-target stk32b
Chr5:78955285..78955302 16/18 Antisense off-target pdss2
Chr9:20543262..20543279 16/18 Antisense off-target adcy9
Chr1:57058192..57058209 16/18 unknown
Chr3:38113019..38113036 16/18 unknown
Chr3:39285155..39285172 16/18 unknown
Publications
First: The competence of Xenopus blastomeres to produce neural and retinal progeny is repressed by two endo-mesoderm promoting pathways., Dev Biol 2007          
Most recent:
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