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Summary Attributions Wiki
XB-MORPHOLINO-17311263
Morpholino Name: cpsf4 MO1
Synonyms: TGas053l04, Xtcpsf30kDa
Target mRNA: cpsf4

Morpholino Type: uncategorized morpholino
Sequence: 5' CCACACAAGCAATTAACTCCTGCAT 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 25/25 24/25 24/25
genome
MO
 
5' ATGCAGGAGTTAATTGCTTGTGTGG 3'
   |||||||||||||||||||||||||
3' TACGTCCTCAATTAACGAACACACC 5'
 
5' ATGCAGGAGTTAATCGCTTGTGTGG 3'
   |||||||||||||| ||||||||||
3' TACGTCCTCAATTAACGAACACACC 5'
 
5' ATGCAGGAGTTAATCGCTTGTGTGG 3'
   |||||||||||||| ||||||||||
3' TACGTCCTCAATTAACGAACACACC 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr9_10L:95631148..95631172 24/25 Antisense target cpsf4.L
Chr9_10S:83251461..83251485 24/25 Antisense target cpsf4.S
Chr8L:73885402..73885426 21/25 Sense off-target ngb.L
Chr8S:231982..232006 21/25 Antisense off-target plxna3.L
Chr2L:124838845..124838869 21/25 Sense off-target LOC108708470
Chr6S:36910136..36910160 21/25 Antisense off-target LOC108719946
Chr9_10S:53510441..53510465 21/25 Antisense off-target LOC108702928
Chr2S:102737546..102737570 22/25 unknown
Chr3L:77142762..77142786 21/25 unknown
Chr8L:130953988..130954012 21/25 unknown
Chr8L:130977011..130977035 21/25 unknown
tropicalis 10.0 Chr9:47263917..47263941 25/25 Antisense target cpsf4
Chr9:47263917..47263941 25/25 Sense off-target ptcd1
Chr6:16188207..16188231 22/25 Sense off-target paxip1
Chr4:121799859..121799883 21/25 Antisense off-target rangap1
Chr4:121799859..121799883 21/25 Sense off-target LOC100488097
Chr4:32677490..32677514 21/25 unknown
Publications
???morpholino.displaySummary.papersFirst??? Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides., PLoS Genet 2006                                      
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