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Summary Attributions Wiki
XB-MORPHOLINO-23619107
Morpholino Name: pnhd MO5
Synonyms: Pnhd MOatg
Target mRNA: pnhd

Morpholino Type: translation blocking morpholino (ATG)
Sequence: 5' ACAAGAAAAGATGTTCCATGTCTG 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 23/24 24/24 22/24
genome
MO
 
5' CAGACATGGAACATCTTTTCTTGG 3'
   ||||||||||||||||||||||| 
3' GTCTGTACCTTGTAGAAAAGAACA 5'
 
5' CAGACATGGAACATCTTTTCTTGT 3'
   ||||||||||||||||||||||||
3' GTCTGTACCTTGTAGAAAAGAACA 5'
 
5' CAGACATGGCACATCTTTTCTTGG 3'
   ||||||||| ||||||||||||| 
3' GTCTGTACCTTGTAGAAAAGAACA 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr1L:114014032..114014055 24/24 Antisense target pnhd.L
Chr1S:95267767..95267790 22/24 Antisense target pnhd.S
Chr3S:69979432..69979455 20/24 Antisense off-target grm3.S
Chr3S:69979432..69979455 20/24 Sense off-target elapor2.S
Chr6S:60915993..60916016 20/24 Sense off-target LOC108720028
Chr8L:11433348..11433371 20/24 Sense off-target LOC121397116
Chr5L:69627570..69627593 21/24 unknown
Chr6L:118302766..118302789 21/24 unknown
Chr1L:225779276..225779299 20/24 unknown
tropicalis 10.0 Chr1:104459700..104459723 23/24 Antisense target pnhd
Chr1:104459700..104459723 23/24 Sense off-target LOC116412038
Chr3:81085889..81085912 20/24 Antisense off-target grm3
Chr2:52382729..52382752 20/24 unknown
Publications
???morpholino.displaySummary.papersFirst??? Pinhead signaling regulates mesoderm heterogeneity via FGF receptor-dependent pathway., Development 2020                                        
???morpholino.displaySummary.papersRecent??? Pinhead antagonizes Admp to promote notochord formation., iScience 2021                              
???morpholino.displaySummary.papersAll???