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Summary Attributions Wiki
XB-GRNA-23659747

gRNA Name: ptf1a gRNA3
Synonyms: ptf1a/p48-T2
Genomic Target: ptf1a

PAM Sequence: AGG
Sequence: 5' GGAGATGCAGCAGCTCAGGC 3'



Genomic Target tropicalis laevis.L
Identities 20/20 20/20
genome
gRNA
5' GCCTGAGCTGCTGCATCTCC 3'
   ||||||||||||||||||||
3' CGGACTCGACGACGTAGAGG 5'
5' GCCTGAGCTGCTGCATCTCC 3'
   ||||||||||||||||||||
3' CGGACTCGACGACGTAGAGG 5'
    
Genomic Alignments Position Identity Strand Genomic Target
laevis 9.2 chr6L:23329357..23329376 20/20 Sense target ptf1a.L
chr9_10L:41780087..41780106 18/20 Antisense off-target LOC108701180
chr6L:51855878..51855897 16/20 Antisense off-target ulk4.L
chr9_10S:32814955..32814974 16/20 Antisense off-target fdxr.S
chr1L:205241511..205241530 16/20 Antisense off-target pdzd2.L
chr4L:140976594..140976613 16/20 Antisense off-target prickle2.L
chr1S:44318213..44318232 16/20 Antisense off-target LOC108706660 [provisional:fbxw7]
chr4S:108384848..108384867 18/20 unknown
chr6L:17475373..17475392 18/20 unknown
chr1S:38600530..38600549 17/20 unknown
chr5L:65360159..65360178 17/20 unknown
chr7S:57051449..57051468 17/20 unknown
chr6S:45180008..45180027 16/20 unknown
chr8S:64549065..64549084 16/20 unknown
tropicalis 10.0 Chr6:26467531..26467550 20/20 Sense ptf1a
Chr2:22806657..22806676 18/20 Antisense pou1f1
Chr8:520551..520570 18/20 Sense ccdc120
Chr8:75382061..75382080 17/20 Antisense abcf1
Chr4:148872629..148872648 17/20 Antisense arhgef3.2
Chr6:53494640..53494659 16/20 Antisense ulk4
Chr2:62635892..62635911 16/20 Antisense ap4b1
Chr6:91849397..91849416 16/20 Antisense ranbp9
Chr6:1479634..1479653 19/20
Chr6:21240005..21240024 18/20
Chr1:156759079..156759098 16/20
Publications
???morpholino.displaySummary.papersFirst??? Targeted gene disruption in Xenopus laevis using CRISPR/Cas9., Cell Biosci 2015              
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