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Summary Stage Literature (2219) Attributions Wiki
XB-STAGE-10

Papers associated with tadpole stage

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Quantitative proteome dynamics across embryogenesis in a model chordate., Frese AN, Mariossi A, Levine MS, Wühr M., iScience. April 19, 2024; 27 (4): 109355.                            

Bi-allelic ACBD6 variants lead to a neurodevelopmental syndrome with progressive and complex movement disorders., Kaiyrzhanov R, Rad A, Lin SJ, Bertoli-Avella A, Kallemeijn WW, Godwin A, Zaki MS, Huang K, Lau T, Petree C, Efthymiou S, Karimiani EG, Hempel M, Normand EA, Rudnik-Schöneborn S, Schatz UA, Baggelaar MP, Ilyas M, Sultan T, Alvi JR, Ganieva M, Fowler B, Aanicai R, Tayfun GA, Al Saman A, Alswaid A, Amiri N, Asilova N, Shotelersuk V, Yeetong P, Azam M, Babaei M, Monajemi GB, Mohammadi P, Samie S, Banu SH, Pinto Basto J, Kortüm F, Bauer M, Bauer P, Beetz C, Garshasbi M, Issa AH, Eyaid W, Ahmed H, Hashemi N, Hassanpour K, Herman I, Ibrohimov S, Abdul-Majeed BA, Imdad M, Isrofilov M, Kaiyal Q, Khan S, Kirmse B, Koster J, Lourenço CM, Mitani T, Moldovan O, Murphy D, Najafi M, Pehlivan D, Rocha ME, Salpietro V, Schmidts M, Shalata A, Mahroum M, Talbeya JK, Taylor RW, Vazquez D, Vetro A, Waterham HR, Zaman M, Schrader TA, Chung WK, Guerrini R, Lupski JR, Gleeson J, Suri M, Jamshidi Y, Bhatia KP, Vona B, Schrader M, Severino M, Guille M, Tate EW, Varshney GK, Houlden H, Maroofian R., Brain. April 4, 2024; 147 (4): 1436-1456.                            

Techniques for Rapidly Sampling Six Crucial Organs in Adult Xenopus., Jonas-Closs RA, Peshkin L., J Vis Exp. February 16, 2024; (204):


ZSWIM4 regulates embryonic patterning and BMP signaling by promoting nuclear Smad1 degradation., Wang C, Liu Z, Zeng Y, Zhou L, Long Q, Hassan IU, Zhang Y, Qi X, Cai D, Mao B, Lu G, Sun J, Yao Y, Deng Y, Zhao Q, Feng B, Zhou Q, Chan WY, Zhao H., EMBO Rep. February 1, 2024; 25 (2): 646-671.                                          

Epichordal vertebral column formation in Xenopus laevis., Takahashi Y, Wakabayashi R, Kitajima S, Uchiyama H., J Morphol. February 1, 2024; 285 (2): e21664.                      

The sulfotransferase XB5850668.L is required to apportion embryonic ectodermal domains., Marchak A, Neilson KM, Majumdar HD, Yamauchi K, Klein SL, Moody SA., Dev Dyn. December 1, 2023; 252 (12): 1407-1427.                  

Time-resolved quantitative proteomic analysis of the developing Xenopus otic vesicle reveals putative congenital hearing loss candidates., Baxi AB, Nemes P, Moody SA., iScience. September 15, 2023; 26 (9): 107665.                          

Exploring the repairing mechanisms of reduced graphene oxide (rGo) on the dysregulation of Xenopus Laevis larva hypothalamus-pituitary-thyroid (HPT) axis caused by chiral triazole fungicide metconazole., Deng Y, Zheng M, Liu R, Zeng H, Diao J, Xiao R, Su X., Pestic Biochem Physiol. September 1, 2023; 195 105529.

Pleiotropic role of TRAF7 in skull-base meningiomas and congenital heart disease., Mishra-Gorur K, Barak T, Kaulen LD, Henegariu O, Jin SC, Aguilera SM, Yalbir E, Goles G, Nishimura S, Miyagishima D, Djenoune L, Altinok S, Rai DK, Viviano S, Prendergast A, Zerillo C, Ozcan K, Baran B, Sencar L, Goc N, Yarman Y, Ercan-Sencicek AG, Bilguvar K, Lifton RP, Moliterno J, Louvi A, Yuan S, Deniz E, Brueckner M, Gunel M., Proc Natl Acad Sci U S A. April 18, 2023; 120 (16): e2214997120.                                            

Genome-wide analysis of copy-number variation in humans with cleft lip and/or cleft palate identifies COBLL1, RIC1, and ARHGEF38 as clefting genes., Lansdon LA, Dickinson A, Arlis S, Liu H, Hlas A, Hahn A, Bonde G, Long A, Standley J, Tyryshkina A, Wehby G, Lee NR, Daack-Hirsch S, Mohlke K, Girirajan S, Darbro BW, Cornell RA, Houston DW, Murray JC, Manak JR., Am J Hum Genet. January 5, 2023; 110 (1): 71-91.                          

The cellular basis of cartilage growth and shape change in larval and metamorphosing Xenopus frogs., Rose CS., PLoS One. January 1, 2023; 18 (1): e0277110.                                  

Predictive assays for craniofacial malformations: evaluation in Xenopus laevis embryos exposed to triadimefon., Battistoni M, Metruccio F, Di Renzo F, Bacchetta R, Menegola E., Arch Toxicol. October 1, 2022; 96 (10): 2815-2824.          

Cell landscape of larval and adult Xenopus laevis at single-cell resolution., Liao Y, Ma L, Guo Q, E W, Fang X, Yang L, Ruan F, Wang J, Zhang P, Sun Z, Chen H, Lin Z, Wang X, Wang X, Sun H, Fang X, Zhou Y, Chen M, Shen W, Guo G, Han X., Nat Commun. July 25, 2022; 13 (1): 4306.                                                        

Developmental mRNA m5C landscape and regulatory innovations of massive m5C modification of maternal mRNAs in animals., Liu J, Huang T, Chen W, Ding C, Zhao T, Zhao X, Cai B, Zhang Y, Li S, Zhang L, Xue M, He X, Ge W, Zhou C, Xu Y, Xu Y, Zhang R., Nat Commun. May 5, 2022; 13 (1): 2484.          

Cilia-localized GID/CTLH ubiquitin ligase complex regulates protein homeostasis of sonic hedgehog signaling components., Hantel F, Liu H, Fechtner L, Neuhaus H, Ding J, Arlt D, Walentek P, Villavicencio-Lorini P, Gerhardt C, Hollemann T, Pfirrmann T., J Cell Sci. May 1, 2022; 135 (9):                                     

The initiation and maintenance of a differentiated state in development., Javed K, Gurdon JB., Dev Biol. March 1, 2022; 483 34-38.        

Injury-induced Erk1/2 signaling tissue-specifically interacts with Ca2+ activity and is necessary for regeneration of spinal cord and skeletal muscle., Levin JB, Borodinsky LN., Cell Calcium. March 1, 2022; 102 102540.                                  

Translesion DNA synthesis-driven mutagenesis in very early embryogenesis of fast cleaving embryos., Lo Furno E, Busseau I, Aze A, Lorenzi C, Saghira C, Danzi MC, Zuchner S, Maiorano D., Nucleic Acids Res. January 25, 2022; 50 (2): 885-898.                          

Generation of a new six1-null line in Xenopus tropicalis for study of development and congenital disease., Coppenrath K, Tavares ALP, Shaidani NI, Wlizla M, Moody SA, Horb M., Genesis. December 1, 2021; 59 (12): e23453.        

Antibacterial and In Vivo Studies of a Green, One-Pot Preparation of Copper/Zinc Oxide Nanoparticle-Coated Bandages., Deokar AR, Perelshtein I, Saibene M, Perkas N, Mantecca P, Nitzan Y, Gedanken A., Membranes (Basel). June 22, 2021; 11 (7):               

Stage-dependent sequential organization of nascent smooth muscle cells and its implications for the gut coiling morphogenesis in Xenopus larva., Akinaga K, Azumi Y, Mogi K, Toyoizumi R., Zoology (Jena). June 1, 2021; 146 125905.

Non-canonical Hedgehog signaling regulates spinal cord and muscle regeneration in Xenopus laevis larvae., Hamilton AM, Balashova OA, Borodinsky LN., Elife. May 6, 2021; 10                               

How to Grow Xenopus laevis Tadpole Stages to Adult., Ishibashi S, Amaya E., Cold Spring Harb Protoc. March 1, 2021; 2021 (3):


Heterologous functional expression of ascidian Nav1 channels and close relationship with the evolutionary ancestor of vertebrate Nav channels., Kawai T, Hashimoto M, Eguchi N, Nishino JM, Jinno Y, Mori-Kreiner R, Aspåker M, Chiba D, Ohtsuka Y, Kawanabe A, Nishino AS, Okamura Y., J Biol Chem. January 1, 2021; 296 100783.                  

Structural basis for PRC2 decoding of active histone methylation marks H3K36me2/3., Finogenova K, Bonnet J, Poepsel S, Schäfer IB, Finkl K, Schmid K, Litz C, Strauss M, Benda C, Müller J., Elife. November 19, 2020; 9                             

Mcrs1 interacts with Six1 to influence early craniofacial and otic development., Neilson KM, Keer S, Bousquet N, Macrorie O, Majumdar HD, Kenyon KL, Alfandari D, Alfandari D, Moody SA., Dev Biol. November 1, 2020; 467 (1-2): 39-50.                  

Predation threats for a 24-h period activated the extension of axons in the brains of Xenopus tadpoles., Mori T, Kitani Y, Hatakeyama D, Machida K, Goto-Inoue N, Hayakawa S, Yamamoto N, Kashiwagi K, Kashiwagi A., Sci Rep. July 16, 2020; 10 (1): 11737.                    

DNA methylation dynamics underlie metamorphic gene regulation programs in Xenopus tadpole brain., Kyono Y, Raj S, Sifuentes CJ, Buisine N, Sachs L, Denver RJ., Dev Biol. June 15, 2020; 462 (2): 180-196.                                                    

All-fibre supercontinuum laser for in vivo multispectral photoacoustic microscopy of lipids in the extended near-infrared region., Dasa MK, Nteroli G, Bowen P, Messa G, Feng Y, Petersen CR, Koutsikou S, Bondu M, Moselund PM, Podoleanu A, Bradu A, Markos C, Bang O., Photoacoustics. June 1, 2020; 18 100163.            

Evaluation of Effective and Practical Euthanasia Methods for Larval African Clawed Frogs (Xenopus laevis)., Galex IA, Gallant CM, D'Avignon N, Kuchenbrod LM, Fletcher CA, Rogala AR., J Am Assoc Lab Anim Sci. May 1, 2020; 59 (3): 269-274.

Chromatin accessibility dynamics and single cell RNA-Seq reveal new regulators of regeneration in neural progenitors., Kakebeen AD, Chitsazan AD, Williams MC, Saunders LM, Wills AE., Elife. April 27, 2020; 9                             

Xenopus embryos show a compensatory response following perturbation of the Notch signaling pathway., Solini GE, Pownall ME, Hillenbrand MJ, Tocheny CE, Paudel S, Halleran AD, Bianchi CH, Huyck RW, Saha MS., Dev Biol. April 15, 2020; 460 (2): 99-107.        

2,2',4,4'-tetrabromodipheny ether (BDE-47) disrupts gonadal development of the Africa clawed frog (Xenopus laevis)., Li JB, Li YY, Shen YP, Zhu M, Li XH, Qin ZF., Aquat Toxicol. April 1, 2020; 221 105441.

PACT/PRKRA and p53 regulate transcriptional activity of DMRT1., Fujitani K, Otomo A, Nagayama Y, Tachibana T, Kato R, Kawashima Y, Kodera Y, Kato T, Takada S, Tamura K, Takamatsu N, Ito M., Genet Mol Biol. March 30, 2020; 43 (2): e20190017.        

Thyroid hormone receptor beta is critical for intestinal remodeling during Xenopus tropicalis metamorphosis., Shibata Y, Tanizaki Y, Shi YB, Shi YB., Cell Biosci. March 27, 2020; 10 46.                            

The secreted BMP antagonist ERFE is required for the development of a functional circulatory system in Xenopus., Melchert J, Henningfeld KA, Richts S, Lingner T, Jonigk D, Pieler T., Dev Biol. March 15, 2020; 459 (2): 138-148.                                

Six1 proteins with human branchio-oto-renal mutations differentially affect cranial gene expression and otic development., Shah AM, Krohn P, Baxi AB, Tavares ALP, Sullivan CH, Chillakuru YR, Majumdar HD, Neilson KM, Moody SA., Dis Model Mech. March 3, 2020; 13 (3):                                               

Knocking out histone methyltransferase PRMT1 leads to stalled tadpole development and lethality in Xenopus tropicalis., Shibata Y, Okada M, Miller TC, Shi YB, Shi YB., Biochim Biophys Acta Gen Subj. March 1, 2020; 1864 (3): 129482.

Stabilization of Gaze during Early Xenopus Development by Swimming-Related Utricular Signals., Lambert FM, Bacqué-Cazenave J, Le Seach A, Arama J, Courtand G, Tagliabue M, Eskiizmirliler S, Straka H, Beraneck M., Curr Biol. February 24, 2020; 30 (4): 746-753.e4.                  

The myeloid lineage is required for the emergence of a regeneration-permissive environment following Xenopus tail amputation., Aztekin C, Hiscock TW, Butler R, De Jesús Andino F, Robert J, Gurdon JB, Jullien J., Development. February 5, 2020; 147 (3):                                     

Disrupted ER membrane protein complex-mediated topogenesis drives congenital neural crest defects., Marquez J, Criscione J, Charney RM, Prasad MS, Hwang WY, Mis EK, García-Castro MI, Khokha MK., J Clin Invest. February 3, 2020; 130 (2): 813-826.                                

Serotonin and MucXS release by small secretory cells depend on Xpod, a SSC specific marker gene., Kurrle Y, Kunesch K, Bogusch S, Schweickert A., Genesis. February 1, 2020; 58 (2): e23344.              

Role of TrkA signaling during tadpole tail regeneration and early embryonic development in Xenopus laevis., Iimura A, Nishida E, Kusakabe M., Genes Cells. February 1, 2020; 25 (2): 86-99.                

Expression Changes of MHC and Other Immune Genes in Frog Skin during Ontogeny., Lau Q, Igawa T, Komaki S, Satta Y., Animals (Basel). January 6, 2020; 10 (1):         

Coexposure to environmental concentrations of cis-bifenthrin and graphene oxide: Adverse effects on the nervous system during metamorphic development of Xenopus laevis., Li M, Zhu J, Fang H, Wang M, Wang Q, Zhou B., J Hazard Mater. January 5, 2020; 381 120995.            

Thyroid hormone activates Xenopus MBD3 gene via an intronic TRE in vivo., Fu L, Li C, Na W, Shi YB., Front Biosci (Landmark Ed). January 1, 2020; 25 (3): 437-451.

Developmental stage-dependent switching in the neuromodulation of vertebrate locomotor central pattern generator networks., Hachoumi L, Sillar KT., Dev Neurobiol. January 1, 2020; 80 (1-2): 42-57.      

Effect of nano-encapsulation of β-carotene on Xenopus laevis embryos development (FETAX)., Battistoni M, Bacchetta R, Di Renzo F, Metruccio F, Menegola E., Toxicol Rep. January 1, 2020; 7 510-519.                  

Identification of Transient Receptor Potential Channel 4-Associated Protein as a Novel Candidate Gene Causing Congenital Primary Hypothyroidism., Choukair D, Eberle B, Vick P, Hermanns P, Weiss B, Paramasivam N, Schlesner M, Lornsen K, Roeth R, Klutmann C, Kreis J, Hoffmann GF, Pohlenz J, Rappold GA, Bettendorf M., Horm Res Paediatr. January 1, 2020; 93 (1): 16-29.

NA3 glycan: a potential therapy for retinal pigment epithelial deficiency., Chintalapudi SR, Wang X, Wang X, Shi Y, Kocak M, Palamoor M, Davis RN, Hollingsworth TJ, Jablonski MM., FEBS J. December 1, 2019; 286 (24): 4876-4888.

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